Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g1449 ATGCCGACGCCGGTAAACGTGGCAAGGCAATGCTTGACGGAGGAGGCGGCTCGTGTTTTGGACGATGCGGTGGCGGTGGCTCGCCGGCGAAACCATGCGCAGACAACTTCACTTCATGCTATTTCTGCTTTCCTCGCTTTACCTTCTTCCCCTCTCAGGGACGCTTGTTCACGCGCCCGTAGTTGTTCATATAACCCGCGTTTACAATTCAAAGCCTTAGACCTCTCTGTGGGTGTCTCTCTCGATCGATTGCCCACAACAAAGACTCTTGAAGATGACCCTCCTATTTCGAATTCTCTCATGGCTGCTATTAAGAGATCACAAGCTAATCAGAGGAGACATCCTGAGAGTTTTCATTTGATGCAGATGCATATGCATATGAATCAGCATCAGCATCAGCAGCAGCAAACGGCTTCGTTTTTGAAGGTGGAGATTAAGCATTTCATTTTGTCTATTCTTGATGATCCGATTGTGAGCAGGGTTTTTGGGGAGGCTAATTTTAGAAGCTGTGATATCAAGCTTGCATTGCTTCAACCTCCTATGACTCAGGCTTCTTCTAGATTCTTCAGGGGTCGTTACCCACCTTTGTTTTTGTGTAATATACCAGGTTCTGAGATGGATCCTCGTCCTGGTTTTAACTTCCCTTTCATGGCTAATAATCCGACTGGTCAGAAAGATGGGGATGATGAGAATTGTAGGAGAGTTGTGGAGGTTCTTGTGAGGAAGACAAAGAGGAATCCTTTGTTCATGGGTGTTTATGCGAAGGGTGCTCTTAGGAGATTCAGTGACACTGTACAGAGAGGTCGAGTGGGAATGTTGTCAGCTGATATTGCTGGGATTAGTATGATTTGCATTGAGAAGGAGATTTCTGAGTTTCTGGTTGGGGGTGGCAGTGATGAAGAGAAGATGCTTTTGAAGTTTAAGGAATTGAGTCGTGCAGTTGAGCAGTGCTCGGGTCCAGGTATTGTTGTGAATTTTGGAGAGCTTGAGGGATTTGTGGGGGATGGTGTGTCTGGTGTTGCTGTGGATTTTGTTGTCTCACAACTGACAAGCTTATTGGGAATCCATGGTGAGAAGTTATGGCTGGTTGGCATGGCGGGAACATCTGTTGTATATTCCAAGTTTTTAGCTATGTTCCCAACTGTGGAAAAGGATTGGGATCTGAATCTGCTGACCATGACATCTGCCTCCCCTTCAATGGAGGGGCTCTACTCTAAATCCAGTTTGATGGGGTCCTTCGTGCCATTTGGTGGTTTCTTTTCCACACCACCTGAATTCAAAAACCCAGTTAGCTGTACAAATCAATCTTCTGCAAGCTGTCATGCATGCAATGAGAAGTGTGGACAAGAAGTTGCTGATGTTTTGAAGGTAGGTCCTACGACAAAAGCATCTAGTCGCTTAATGAGCTTGCCTTGGCTGCAACCGGTTAATGCGGATAAAGATAAACGACTGGATGTTGCAAGGACTAATGAAGAATTCACAAGTCTGAATGGTACTATGTTGGGATCACAAAAGAAGTGGGCTGATAATTGTCAGCGTCTTCATCACAACGAGTCATTTCCTGACTTAAATATATCCCAAACAAAGGCACAACTTCCCTCTCTTGATGGCTTACCATTTGGTTTGGGTTTTAGAGAAAGCAGCAGTAAAGATCTATCAGTTGATCAAATCCAACATTCTAAACATGGTCTCTACATGCCTAAAGAGTTACATAGTATTTGCCCATCAAAGCAGATGTTACATGTTTCTTCCGAAACTTCTGGCATCAATACAGGAACTGACAAGGGAGCAGTTGTTGGTTCAAAGAGTCAGCAAACTGACAAGCAGACCCCATGCGTTGCCCCTTCCCCAGTGGCCAACATGAGTCAGGTTGATCACAGATCTTCTTCCTCCCTTTCTTCTGTGACCACTGATTTGGGGTTGGGAACGCTATATGCATCAGCATCTCAGGAGCCAAATACCCCGAAAGTACGAGATCATAGAGAGAGTATGCGGCACTTTTCGGACTCCATTTCAGCTGATCTTGATGCTGTGAATGAAAATACTTCACACAGTATTGCTCAATCCTCTCCTTGCTCTGGTCCCATGGAAGGGAAACTGGATTCAGTAGATTTCAAGTCACTTAACCAGCTTCTTACTGAAAGAGTTAGCTGGCAAGCAGAGGCCATTTCTGCCATCAATCGAACCATGTCCCTCTGCAGATATGGCACTAGAAAGAATAGTGGTTCACATGCTAGAGCAGATGTATGGCTTGCTTTCCTTGGACCTGATAGAGTTGGAAAGAAGAAAATTGCTCTAGCACTTGCAGACGTAATATTTGGAAACACAGAAAGGCTAATCTCTGTGGACATGAGTTCCCAAGACAGAGGCTACCCATTAAATGTGGTTTTTGAATGTCGAAAGTCAATTCGTCAAGATGTGTTTAGGAGGAAGACAGTCGTGGACTATATTGCTGGGGAATTGAACAAACAACCCCATTCAGTTGTATTTCTTGAAAATGTAGATAAAGCTGATTTTCTGGTGCAGAATAGTTTGCTCCATGCAATAAGAACAGGTAAATTTCCAGACTCACATGGCAGGGAAATCAGCATCAGCAATGCAATCTTTATTGTGACTTCAAGTGTCTTCAATGGCGAGCACTCTTTCCTTTTGGAGGAGGAGCATGTGTTTTCTGAGGATAAAATCCTTGAAGCCAAAAGATGTCAAATGCAGTTATTACTCGGACATTCTTCTGAGGATACCATAGGAAGCAGTAACACAAATGTCAGGATAACACTGGGAAGAGAGTCTTCCAAACCAGCAATTCTGAATAAAAGAAAACAGAGTGAAAGAAGTGACTCTCTAGAACAAGCAACCAAATGCAAGGTACAGAAACAGCTCCTGGAGACATCAAGATCTTATCTGGATTTGAATATGCCTGTCAAGGAGGTTGAAGAGGACTGGTTTGATGATTTCTGTAGTCAACTTGATGCCAGAGTAACTTTTAGGCCCTTCGATTTTGATGCACTCGCCGAGAAAATCTTAAAAAACATTAGTTCACGGTTTCAGAAGATCACATTTGGATTAGGTCTTAAGCTTGAAATTGACTATGAAGTCATGATACATATCCTAGCAGCTGCATGGTTATCTGACAAGAAAAATGCTTTGGAGGATTGGGTTGAAAATGTACTAGGTAGAAGCTTCAATAAAGCCTTGCAGAAATACCAACCTAAACCTCAGCATTCAATGAAACTAGTTACCTGTGAAGGGATTGTTATGGAAGAGCAAGCTCCTGGAGTTTGCCTTCCTTCTAATATTAAACTCTAA 3306 0.4344 MPTPVNVARQCLTEEAARVLDDAVAVARRRNHAQTTSLHAISAFLALPSSPLRDACSRARSCSYNPRLQFKALDLSVGVSLDRLPTTKTLEDDPPISNSLMAAIKRSQANQRRHPESFHLMQMHMHMNQHQHQQQQTASFLKVEIKHFILSILDDPIVSRVFGEANFRSCDIKLALLQPPMTQASSRFFRGRYPPLFLCNIPGSEMDPRPGFNFPFMANNPTGQKDGDDENCRRVVEVLVRKTKRNPLFMGVYAKGALRRFSDTVQRGRVGMLSADIAGISMICIEKEISEFLVGGGSDEEKMLLKFKELSRAVEQCSGPGIVVNFGELEGFVGDGVSGVAVDFVVSQLTSLLGIHGEKLWLVGMAGTSVVYSKFLAMFPTVEKDWDLNLLTMTSASPSMEGLYSKSSLMGSFVPFGGFFSTPPEFKNPVSCTNQSSASCHACNEKCGQEVADVLKVGPTTKASSRLMSLPWLQPVNADKDKRLDVARTNEEFTSLNGTMLGSQKKWADNCQRLHHNESFPDLNISQTKAQLPSLDGLPFGLGFRESSSKDLSVDQIQHSKHGLYMPKELHSICPSKQMLHVSSETSGINTGTDKGAVVGSKSQQTDKQTPCVAPSPVANMSQVDHRSSSSLSSVTTDLGLGTLYASASQEPNTPKVRDHRESMRHFSDSISADLDAVNENTSHSIAQSSPCSGPMEGKLDSVDFKSLNQLLTERVSWQAEAISAINRTMSLCRYGTRKNSGSHARADVWLAFLGPDRVGKKKIALALADVIFGNTERLISVDMSSQDRGYPLNVVFECRKSIRQDVFRRKTVVDYIAGELNKQPHSVVFLENVDKADFLVQNSLLHAIRTGKFPDSHGREISISNAIFIVTSSVFNGEHSFLLEEEHVFSEDKILEAKRCQMQLLLGHSSEDTIGSSNTNVRITLGRESSKPAILNKRKQSERSDSLEQATKCKVQKQLLETSRSYLDLNMPVKEVEEDWFDDFCSQLDARVTFRPFDFDALAEKILKNISSRFQKITFGLGLKLEIDYEVMIHILAAAWLSDKKNALEDWVENVLGRSFNKALQKYQPKPQHSMKLVTCEGIVMEEQAPGVCLPSNIKL 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g1449 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 1040 IPR027417 -
Mibi05g1449 1101 Gene3D - 10 179 IPR036628 -
Mibi05g1449 1101 ProSiteProfiles Clp repeat (R) domain profile. 8 184 IPR004176 -
Mibi05g1449 1101 SUPERFAMILY Double Clp-N motif 12 118 IPR036628 -
Mibi05g1449 1101 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1067 - -
Mibi05g1449 1101 Pfam AAA domain (Cdc48 subfamily) 751 877 IPR003959 GO:0005524|GO:0016887
Mibi05g1449 1101 MobiDBLite consensus disorder prediction 584 614 - -
Mibi05g1449 1101 Gene3D - 695 997 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g1449 Mibi-ChrMibi05 17189298 17194201 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1449 05 17189298 17194201 Mibi08g0644 08 12180430 12184579 CCT
Mibi05g1449 05 17189298 17194201 Mibi05g1449 05 17189298 17194201 ECH
Mibi05g1449 05 17189298 17194201 Mibi08g1343 08 29467423 29471963 ECH
Mibi05g1449 05 17189298 17194201 Mibi08g0644 08 12180430 12184579 ECH
Mibi08g1343 08 29467423 29471963 Mibi05g1449 05 17189298 17194201 ECH
Mibi06g2055 06 41060169 41063365 Mibi05g1449 05 17189298 17194201 ECH