Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo5g00999 ATGGCTTCTTCGACTCAATTTGTCACCACTTTGGTTGCCCTAATTCTCTTCCAACTCCTAATAGGTTCATATTCAACAACATTCACAATTGTGAACAATTGCGGTTACACAGTTTGGCCAGGAATTTTATCCGGCGCCGGAACAGAACCGTTCTCCACCACCGGTTTCGCTCTTCAACCCGGCGAGTCCAATGCTCTCGCCGTACCACCATCCTGGTCCGGCCGACTATGGGGACGAACCCTCTGCTCTCAAGACCCCACCGGAAAATTCTCATGCATCACCGGCGACTGTGATTCCTCCACCATCGAATGTGCCGGAAGAAACGCTATACCACCGGCAACATTAGCAGAATTCACACTCAACGGCAACGGAGGACTTGATTTCTTCGACGTTAGTCTCGTCGATGGTTACAATCTCCCCATATTGATCGAACCACACGGTGAAACCGGTGGCGGAAACTGCACGGCAACGGGTTGCTCCGTCGACTTAAACGCGGCGTGTCCGACGGAGTTGAAAGTGATGAGTAGTAATAGCGGCGGAGGTGAAGAGAGCGTGGCATGTAAAAGCGCGTGTGAAGCCTTTAGGGATCCGCAATATTGCTGCAGTGGCGCTTATGGTTCGCCTGATACGTGTAAACCAAGTTCCTACTCGCAGTTTTTTAAGAGTGCGTGTCCACGCGCTTATAGTTATGCTTATGATGATGGAACTAGCACTTTCACTTGTGCTTCTGCTGATTATACCATCACTTTTTGCCCCACGCCCTCCGCAAGTTCAATCAAATCTGGGAATGGAAAATATCCTTTGCCGGCTACAGACGTGTCTGGTGTTCGACATCTGGATGAGAGAGTAAACAACATTGTAACGGTTGTTATTGCCTTTGTTTTGATGGCTTTGGTGGTTGACCGGTCGTGGTAA 915 0.4951 MASSTQFVTTLVALILFQLLIGSYSTTFTIVNNCGYTVWPGILSGAGTEPFSTTGFALQPGESNALAVPPSWSGRLWGRTLCSQDPTGKFSCITGDCDSSTIECAGRNAIPPATLAEFTLNGNGGLDFFDVSLVDGYNLPILIEPHGETGGGNCTATGCSVDLNAACPTELKVMSSNSGGGEESVACKSACEAFRDPQYCCSGAYGSPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASADYTITFCPTPSASSIKSGNGKYPLPATDVSGVRHLDERVNNIVTVVIAFVLMALVVDRSW 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo5g00999 304 PIRSF PR5 1 293 IPR001938 -
Mepo5g00999 304 SMART tha2 28 252 IPR001938 -
Mepo5g00999 304 CDD TLP-PA 27 251 - -
Mepo5g00999 304 Gene3D Thaumatin 26 252 IPR037176 -
Mepo5g00999 304 ProSiteProfiles Thaumatin family profile. 25 252 IPR001938 -
Mepo5g00999 304 PANTHER OS03G0233200 PROTEIN 14 252 IPR001938 -
Mepo5g00999 304 FunFam THAUMATIN-LIKE PROTEIN 1 26 252 - -
Mepo5g00999 304 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Mepo5g00999 304 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mepo5g00999 304 PRINTS Pathogenesis-related protein signature 242 251 IPR001938 -
Mepo5g00999 304 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mepo5g00999 304 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Mepo5g00999 304 Pfam Thaumatin family 32 252 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo5g00999 Mepo-Chr5 9858242 9860808 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo5g00999 7 257 Receptor kinase-like Gene Family AT5G38280 50.198 5.13e-83 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo5g00999 - - gmx:100806478 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07844 3 91522909 91526441 Mepo5g00999 5 9858242 9860808 ECH
Mepo2g02473 2 34486255 34490400 Mepo5g00999 5 9858242 9860808 ECH
Mepo5g00999 5 9858242 9860808 Mepo5g00999 5 9858242 9860808 ECH
Mepo2g02472 2 34473524 34475757 Mepo5g00999 5 9858242 9860808 ECH
Mepo5g00999 5 9858242 9860808 Mepo1g02137 1 22017453 22019022 PCT