Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07844 ATGGATCAACTAAGTACTAAATTATTTTCAATTTTCCTTATCATACTTAATCTTTCAATACCAGAGGTATTATCAACAACATTCACACTCGTTAACAAATGCAACTACACAGTATGGCCAGGAATTCTTTCCAACGCCGGAGTTACGCCGCTTTCTACCACCGGTTTCGTTCTTCAATCCGGCGATTCCAAATCAATCACCCCACCCGCTTCCTGGGGAGGCCGTTTCTGGGGCCGCACTCTCTGTACCCAAGACTCTACCGGAAAATTCTCCTGTCTCACCGGCGATTGTAACTCCGGCAAACTCGAATGCTCCGGCAACGGCGCAACACCACCAGCTACCTTAGCGGAATTCACTCTTGACGGATCTGGTGGACTCGATTTCTTCGATGTGAGTTTAGTTGACGGTTACAACGTTCCGATGCTTGTAGTTCCACAAGGTGGCTCCGGTGATAACTGTACGAATACTGGTTGTATTAGGGATTTGCTCGGCGCGTGTCCTTCAGAGCTTAAGGTTACGAGCGTGGACGGGAAAGAGAGTGTGGCGTGTAAAAGTGCTTGTGAGGCGTTTGGAACGGCGCAGTATTGTTGCAGCGGCGCGTATGGTTCACCTAACACTTGTAAACCTTCGAGTTATTCCGAGTTGTTTAAAAGTGCTTGCCCACGCGCGTATAGCTACGCGTACGACGATAAGACAAGCACGTTTACATGTGCTTCTGCGTCTGAATACACAATCACTTTTTGCCCCTCCACTAACAGCCCAAGTCAAAAGTCGTGGCAGGGACAAAATCCGAAATCAGATGGCAGTGACTCATCATCGCCTCAGCTTAACAACGGCTCAAACTCAATGGTGTACGTTGGTGGGTTTGATCAGAGTGAAATATCATGGGCCACGTGTATCAATGTGTGGGAATCCCAAACCATTCTTACCATCACAACGGCTATGTGGCTCCTGTATCAGCTTTTCCATTTCTAA 975 0.4769 MDQLSTKLFSIFLIILNLSIPEVLSTTFTLVNKCNYTVWPGILSNAGVTPLSTTGFVLQSGDSKSITPPASWGGRFWGRTLCTQDSTGKFSCLTGDCNSGKLECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVVPQGGSGDNCTNTGCIRDLLGACPSELKVTSVDGKESVACKSACEAFGTAQYCCSGAYGSPNTCKPSSYSELFKSACPRAYSYAYDDKTSTFTCASASEYTITFCPSTNSPSQKSWQGQNPKSDGSDSSSPQLNNGSNSMVYVGGFDQSEISWATCINVWESQTILTITTAMWLLYQLFHF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07844 324 SMART tha2 28 249 IPR001938 -
Mepo3g07844 324 PANTHER OS03G0233200 PROTEIN 20 249 IPR001938 -
Mepo3g07844 324 Pfam Thaumatin family 32 249 IPR001938 -
Mepo3g07844 324 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
Mepo3g07844 324 CDD TLP-PA 27 248 - -
Mepo3g07844 324 Gene3D Thaumatin 26 249 IPR037176 -
Mepo3g07844 324 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Mepo3g07844 324 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Mepo3g07844 324 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mepo3g07844 324 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Mepo3g07844 324 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mepo3g07844 324 MobiDBLite consensus disorder prediction 251 276 - -
Mepo3g07844 324 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Mepo3g07844 324 FunFam THAUMATIN-LIKE PROTEIN 1 26 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07844 Mepo-Chr3 91522909 91526441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07844 11 266 Receptor kinase-like Gene Family AT5G38280 51.145 1.74e-90 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07844 - - gmx:100780102 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07844 3 91522909 91526441 Mepo5g00999 5 9858242 9860808 ECH
Mepo3g07844 3 91522909 91526441 Mepo3g07844 3 91522909 91526441 ECH