Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02472 ATGGATCTATTAGCCTCGACTTACATCACTCTCATTACTCTTCTTTTCCTCACTCCCAAAGGTATCACTGGTTCAACCTTCACATTTGTGAACAAATGTGACTACACAGTATGGCCAGGTATTCTAGCAAATGCTGGTAGCCCAACACTTGGAAGCACCGGTTTCGAGCTTCCACAAGAAACCACTCGCACTTTCCAAGCTCCAGCCGGTTGGTCCGGCCGGTTCTGGGCTCGAACCGGTTGCAACTTCGACGGATCCGGTACCGGTTCATGTCTCACCGGAGACTGTGGCTCAAACATGGTAGAATGCAACGGTGCCGGAGCTGCACCACCAGCAACCCTAGCTGAGTTCACTCTTGGCACCATAGGACAAGATTTCTACGACGTGAGTCTCGTTGATGGCTACAATCTACCCATGATTGTTGAAGGTTCTGGTGGGTCGGGTATGTGTGAGTCCACCGGGTGTACGTCGGATCTGAACCAGCAATGTCCGGCGGAGTTGAGAGCTTCAGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGTAGTCCTGAGTATTGTTGTAGTGGCGCGTATGGTTCACCGGCTACTTGTAGACCGTCGATTTACTCGGAAATGTTTAAAGCTGCTTGCCCTAGATCGTATAGCTACGCTTACGATGATGCTTCCAGTACTTTTACTTGTACTGCTGCGGATTATACCGTTACCTTTTGTCCATCTTCTCCAAGTAAAAAATCATCACAATATCCAACTACTCCAATGAACTCAACACCATTGCCAGGGGCAGGGGCAGGGGCAGTGATAGGGACTCCTGAAGTTGGAACAGGATCTGAAAATGGAGTTCAATACACGGGTACAGACACACCCATTGGGTATTCAGTTCCGGTTAATTCTGGGTCCGGATCAGCATCTAATTCAGGATCAGGAGGAGAAACCATGCTTGCTGATGGATCATATTTAGCTGGATTAGCCATGGGAGACTCCTCTACAACAACTTCATCTGCATTTGTTTACTCTTTTGGCCTTTTGCTTATTCTCTTGTTGCTTTAG 1053 0.4843 MDLLASTYITLITLLFLTPKGITGSTFTFVNKCDYTVWPGILANAGSPTLGSTGFELPQETTRTFQAPAGWSGRFWARTGCNFDGSGTGSCLTGDCGSNMVECNGAGAAPPATLAEFTLGTIGQDFYDVSLVDGYNLPMIVEGSGGSGMCESTGCTSDLNQQCPAELRASDGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDASSTFTCTAADYTVTFCPSSPSKKSSQYPTTPMNSTPLPGAGAGAVIGTPEVGTGSENGVQYTGTDTPIGYSVPVNSGSGSASNSGSGGETMLADGSYLAGLAMGDSSTTTSSAFVYSFGLLLILLLL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02472 350 FunFam THAUMATIN-LIKE PROTEIN 1 25 240 - -
Mepo2g02472 350 SUPERFAMILY Osmotin, thaumatin-like protein 26 241 IPR037176 -
Mepo2g02472 350 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Mepo2g02472 350 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Mepo2g02472 350 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Mepo2g02472 350 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Mepo2g02472 350 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Mepo2g02472 350 ProSiteProfiles Thaumatin family profile. 24 240 IPR001938 -
Mepo2g02472 350 SMART tha2 27 240 IPR001938 -
Mepo2g02472 350 PANTHER OS03G0233200 PROTEIN 12 240 IPR001938 -
Mepo2g02472 350 CDD TLP-PA 26 239 - -
Mepo2g02472 350 Pfam Thaumatin family 31 240 IPR001938 -
Mepo2g02472 350 Gene3D Thaumatin 25 240 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02472 Mepo-Chr2 34473524 34475757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02472 6 248 Receptor kinase-like Gene Family AT5G38280 45.946 1.08e-74 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02472 - - cam:101493007 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02472 2 34473524 34475757 Mepo2g02472 2 34473524 34475757 ECH
Mepo2g02472 2 34473524 34475757 Mepo5g00999 5 9858242 9860808 ECH