Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03493 ATGTCTCCTGATATCATAACCGCTGCAACCAACATCACCAACACTCAATCTAAGGCCACAAAACGTGCCTTTGTCACCTTCCTTGCTGGAAATGGTGACTATGTGAAGGGTGTTGTTGGCTTAGCCAAAGGTCTCCGTAAGGTCAAAACCATGTACCCTCTTGTGGTTGCAATGTTACCTGATGTTCCTCAGGAACATAGAAATATTCTCACCTCTCAAGGTTGCATTGTTAGAGAGATTGAACCGGTTTACCCTCCTGAAAACCAAACTCAGTTTGCTATGGCTTATTATGTCATCAACTACTCCAAGCTACGTATTTGGGCTTTTGAGGAGTATGACAAGATGATTTACCTTGATGGTGACATACAAGTTTTTGAAAACATTGATCACCTATTTGACTTGCCAAACAACTATTTCTATGCTGTGATGGATTGCTTCTGTGAGGCCTCTTGGCGTCATACCAATCAATATGAAATCGGTTACTGTCAACAGTGCCCTGACAAGGTTCAGTGGCCTACTAATTTTGGGCCCAAACCTCCTCTCTATTTCAATGCTGGCATGTTTGTTTATGAACCAAACATGGCTACTTACCATGATCTTCTTCAAAAACTCCAAGTCACCGAGCCAACTTCCTTTGCTGAGCAGGACTTTTTGAATATGTACTTCAAGGACAAATATAAGCCAATTCCAAATGTTTACAATCTTGTGCTGGCCATGTTGTGGCGTCATCCTGAGAATGTTGAACTTGAGAAAGTCAAAGTTGTTCATTACTGTGCAGCAGGGTCTAAGCCTTGGAGGTACACTGGAGTGGAGGAGAATATGCAAAGAGAAGACATAAAGATGTTGGTGAAGAAGTGGTGGGATGTATATGAAGATGAGAGTTTGGACTACAAGCAACCTGTTAATGCAAATCACTTAGCTTCAGCAATTTTGAAAGCTTCTGATTTGAAGATTGTCCCTGCTCCATCTGCCGCTTAA 978 0.4192 MSPDIITAATNITNTQSKATKRAFVTFLAGNGDYVKGVVGLAKGLRKVKTMYPLVVAMLPDVPQEHRNILTSQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWAFEEYDKMIYLDGDIQVFENIDHLFDLPNNYFYAVMDCFCEASWRHTNQYEIGYCQQCPDKVQWPTNFGPKPPLYFNAGMFVYEPNMATYHDLLQKLQVTEPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGVEENMQREDIKMLVKKWWDVYEDESLDYKQPVNANHLASAILKASDLKIVPAPSAA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03493 325 PANTHER GLYCOGENIN SUBFAMILY MEMBER 11 294 - -
Mepo4g03493 325 FunFam Hexosyltransferase 20 298 - -
Mepo4g03493 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 25 298 IPR029044 -
Mepo4g03493 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 19 298 IPR029044 -
Mepo4g03493 325 Pfam Glycosyl transferase family 8 26 268 IPR002495 GO:0016757
Mepo4g03493 325 CDD GT8_Glycogenin 22 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03493 Mepo-Chr4 44311756 44313598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03493 1 325 Glycosyltransferase AT1G56600 71.642 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03493 K18819 - gmx:548050 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03493 4 44311756 44313598 Mepo4g03493 4 44311756 44313598 ECH
Mepo3g03807 3 47569004 47571387 Mepo4g03493 4 44311756 44313598 ECH
Mepo3g03899 3 48471248 48473749 Mepo4g03493 4 44311756 44313598 PCT