Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03807 ATGGCACCAGAGCTAGTTCCAACTGCTGCAAAATCAGTTACCGGATTCACGAAGCCAGTGACGATACCAAAACGTGCTTATGTAACGTTTCTTGCCGGTAACGGTGATTACGTGAAAGGTGTAATAGGTTTGGCTAAAGGATTGAGGAAGGTGAAGACAGTGTATCCGCTTGTTGTGGCGGTGCTTCCAGATGTACCGGAGGAACACCGTGAGATGTTGGAAGCTCAGGGATGTACTGTTCGTGAGATTGAACCGGTTAATCCACCCGAAAATCAGACTCAGTTTGCTATGCCTTATTACGTCATCAACTATTCCAAACTCCGTATATGGGAGTTTGTGGAATACAGCAAGATGATATACTTGGACGGAGACATTCAAGTTTATGAAAACATAGACCATCTCTTTGATCTACCAGATGGTCATTTCTACGCCGTCATGGATTGTTTTTGTGAGAAAACTTGGAGTCACACACCACAGTACAAAATCGGCTATTGTCAACAATGTCCAGAAAAGGTGCAGTGGCCAAAGGAAATGGGTCAACCTCCTTCACTTTACTTCAATGCTGGCATGTTCTTGTTTGAGCCAAACGTTGAAACTTACCATGATCTTTTAAAGACACTTAAAGTCACTCCTCCTACTCCTTTTGCAGAACAAGATTTCTTGAATATGTATTTCAAGGATATTTATAAGCCAATTCCATTGGTTTACAATCTTGTTCTTGCCATGTTATGGCGCCACCCTGAAAATGTTGAGCTTCATAAAGTCAAGGTTGTTCACTATTGTGCAGCGGGATCAAAGCCTTGGAGATACACAGGGAAGGAAGAGAACATGCAAAGGGAGGATATAAAAATGTTGGTGAAGAAATGGTGGGATATTTACAACGATTCATCTCTTGACTACAAGAATTTGAGTGGAAGTAGTGAAGTACAAACAAATGGTGTTGATATTGAGCCTTTCTTACAGGCATTGTCTGAGGTTGGTCGTGTTCAATATGTTACAGCACCTTCAGCAGCTTAA 1017 0.4179 MAPELVPTAAKSVTGFTKPVTIPKRAYVTFLAGNGDYVKGVIGLAKGLRKVKTVYPLVVAVLPDVPEEHREMLEAQGCTVREIEPVNPPENQTQFAMPYYVINYSKLRIWEFVEYSKMIYLDGDIQVYENIDHLFDLPDGHFYAVMDCFCEKTWSHTPQYKIGYCQQCPEKVQWPKEMGQPPSLYFNAGMFLFEPNVETYHDLLKTLKVTPPTPFAEQDFLNMYFKDIYKPIPLVYNLVLAMLWRHPENVELHKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDSSLDYKNLSGSSEVQTNGVDIEPFLQALSEVGRVQYVTAPSAA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03807 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 303 IPR029044 -
Mepo3g03807 338 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Mepo3g03807 338 CDD GT8_Glycogenin 25 296 - -
Mepo3g03807 338 PANTHER GLYCOGENIN SUBFAMILY MEMBER 22 303 - -
Mepo3g03807 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 22 299 IPR029044 -
Mepo3g03807 338 FunFam Hexosyltransferase 23 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03807 Mepo-Chr3 47569004 47571387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03807 1 338 Glycosyltransferase AT1G56600 74.052 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03807 K18819 - gmx:100809287 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03807 3 47569004 47571387 Mepo3g03807 3 47569004 47571387 ECH
Mepo3g03807 3 47569004 47571387 Mepo4g03493 4 44311756 44313598 ECH