Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g03899 ATGGCACCTGCAATCACCACTGCTGCCGTCAATGCCACCGTCGAGAAATCAAAACTCGACGGTGGTAAGGGCCGTGCCTTTGTGACTTTCCTTGCCGGTAACGCTGATTACATCAAAGGTGTTGTTGGTTTAGCCAAAGGGTTGAGAAAAACCAAAACCATGTACCCTTTGGTTGTTGCTATCTTACCTGATGTTCCTGAAGAACATCGTAAGATCCTTGTTTCACAAGGTTGCATTGTCAAGGAGATTGCTCCTGTGTACCCTCCAGCCAACCAAACCCAGTTTGCTATGGCTTATTATGTCATCAATTACTCCAAACTACGTATCTTTGAGTTTGAGGAGTACAGCAAGATGATCTACTTAGATGGTGATATCCAAGTGTTTGAAAACATTGATCATCTATTTGATCTGCCTGATGATTATTTCTATGCTGTGATGGACTGTTTCTGTGAGAAGACTTGGAGTCACACTCCTCAGTATAAGATTGGATACTGTCAACAATGTCCTGATAAGGTTCAATGGCCATCTAATTTTGGGCCCAAGCCTCCTCTATATTTCAATGCTGGAATGTTTGTTTTTCAGCCTAATGTTGTAACATATCATGATCTACTTGAGAAGGTTAAAATTACCAAACCAACCCCCTTTGCTGAGCAGGACTTTTTGAACATGTATTTCAAGGATAAATACAAGCCTATACCTAATGTGTACAATCTTGTGTTGGCCATGATGTGGCGTCACCCTGAGAATGTTGAGCTTGAGAAAGTTCAAGTTGTTCACTATTGTGCTGCTGGCTCTAAGCCTTGGAGGTATACTGGAGAGGAACAGAACATGGACAGAGAAGACATCAAGATGCTAGTGAAGAAATGGAAAGATATATATGAAGATGAGACATTAGATTACAACAAAAATGTCAGAGTGGAACGTTTTACAGCTGCTCTGTTAGAGGCTGGTGGTCTGAAGTCAATGCCTGCATCAAATGCTGCTTAA 987 0.4164 MAPAITTAAVNATVEKSKLDGGKGRAFVTFLAGNADYIKGVVGLAKGLRKTKTMYPLVVAILPDVPEEHRKILVSQGCIVKEIAPVYPPANQTQFAMAYYVINYSKLRIFEFEEYSKMIYLDGDIQVFENIDHLFDLPDDYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPSNFGPKPPLYFNAGMFVFQPNVVTYHDLLEKVKITKPTPFAEQDFLNMYFKDKYKPIPNVYNLVLAMMWRHPENVELEKVQVVHYCAAGSKPWRYTGEEQNMDREDIKMLVKKWKDIYEDETLDYNKNVRVERFTAALLEAGGLKSMPASNAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g03899 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 295 - -
Mepo3g03899 328 FunFam Hexosyltransferase 23 301 - -
Mepo3g03899 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Mepo3g03899 328 CDD GT8_Glycogenin 25 295 - -
Mepo3g03899 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Mepo3g03899 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 303 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g03899 Mepo-Chr3 48471248 48473749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g03899 1 328 Glycosyltransferase AT1G56600 73.077 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g03899 K18819 - gmx:100800249 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g03899 3 48471248 48473749 Mepo3g03899 3 48471248 48473749 ECH
Mepo3g03899 3 48471248 48473749 Mepo4g03493 4 44311756 44313598 PCT