Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05447 ATGGGCCCATATGGTGGAGATCAATATAATGTTTTGACTCCTCAAATCAGGCTTTGGCCACAGTCAGCACACTGCACAATTTTTTCAAATATAAATAAACGAGGTCGTTTGGCATATGAACACTTGCATGAGATGATAAACGGTCTCTTTCAGCTTAACCAGAGATCCTGGATTCAAATTCAGCCCTGGGAATACAGTGTTAAATTTCTTGAGAGAGATTTTCGCCACTCCTTGCAGTCCCACTCAGCTCGAGGGATTAGTCTCTGCAATTGCGCGCAAAGAATATCCGGTTCACAGCAACAAAACAAATACGTTCTCCGTGTTAGAGAAGTCACAAAAACAACAATGGAGAACCAAGAGAGCAGCATGAGAGGCTCAAGATGGTCTCTCAAGGGAACTACTGCTCTAGTTACTGGTGGAACTCGTGGAATCGGACATGCTGTGGTGGAGGAACTGGCTGAGTTTGGTGCCACAGTGTACACTTGCTCTAGGAATGAAGAAGAGCTAAATAAATGCTTAAATGAGTGGAAAGAAAAGGGTTTTTCTGTTTATGGATCGGTTTGTGATGTGTCTTCTGCTTCTCAAAGAGAGGAGCTTATTCGACAAGTTGCTTCTGCTTTCAACGACAAGCTCAACATACTTGTAAACAATGCTGGTACAAATGTGAGGAAGCCAACAATTGAGTATACAACCGAAGATTATTCAAAAGTGATGACTACTAACTTGGATTCTGCATTCCATGTATGTCAATTGGCATATCCTCTTCTTAAAGAATCTGGAAATGGAAGCATTGTGTTCATTTCCTCTGTTGCATCTCTCACAAGTGTAGGTACTGGATCCATCTATGCAGTGAGTAAAGCCGCAATCAATCAGCTGACAAAAAATCTTGCTTGTGAATGGGCAAAAGACAATATAAGGAGCAATTGTGTTGCACCGTGGTATACAAAAACGTCGCTTGTGGAACAGTTTATTGTTAACAAAGAGTTTGTGGATGAAGTATTATCTCGAACACCGATAAAACGGATAGCAGAAACACATGAAGTGTCTGCCTTGGTGACTTTCCTTTGTCTGCCAGCCGCTTCCTACATCACTGGACAAACTGTTTCTGTTGATGGAGGATTTACTGTGAATGGATTTTCTGGGTTGTTTAAATAA 1155 0.4147 MGPYGGDQYNVLTPQIRLWPQSAHCTIFSNINKRGRLAYEHLHEMINGLFQLNQRSWIQIQPWEYSVKFLERDFRHSLQSHSARGISLCNCAQRISGSQQQNKYVLRVREVTKTTMENQESSMRGSRWSLKGTTALVTGGTRGIGHAVVEELAEFGATVYTCSRNEEELNKCLNEWKEKGFSVYGSVCDVSSASQREELIRQVASAFNDKLNILVNNAGTNVRKPTIEYTTEDYSKVMTTNLDSAFHVCQLAYPLLKESGNGSIVFISSVASLTSVGTGSIYAVSKAAINQLTKNLACEWAKDNIRSNCVAPWYTKTSLVEQFIVNKEFVDEVLSRTPIKRIAETHEVSALVTFLCLPAASYITGQTVSVDGGFTVNGFSGLFK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05447 384 PRINTS Glucose/ribitol dehydrogenase family signature 256 272 IPR002347 -
Mepo3g05447 384 PRINTS Glucose/ribitol dehydrogenase family signature 282 301 IPR002347 -
Mepo3g05447 384 PRINTS Glucose/ribitol dehydrogenase family signature 134 151 IPR002347 -
Mepo3g05447 384 PRINTS Glucose/ribitol dehydrogenase family signature 209 220 IPR002347 -
Mepo3g05447 384 PRINTS Glucose/ribitol dehydrogenase family signature 338 358 IPR002347 -
Mepo3g05447 384 PRINTS Glucose/ribitol dehydrogenase family signature 303 320 IPR002347 -
Mepo3g05447 384 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 269 297 IPR020904 GO:0016491
Mepo3g05447 384 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 131 377 IPR036291 -
Mepo3g05447 384 PANTHER TROPINONE REDUCTASE 127 378 IPR045000 GO:0016491
Mepo3g05447 384 FunFam Short-chain dehydrogenase reductase 117 378 - -
Mepo3g05447 384 Pfam Enoyl-(Acyl carrier protein) reductase 141 375 - -
Mepo3g05447 384 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 262 270 IPR002347 -
Mepo3g05447 384 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 282 301 IPR002347 -
Mepo3g05447 384 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 209 220 IPR002347 -
Mepo3g05447 384 Gene3D - 123 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05447 Mepo-Chr3 68209451 68211941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05447 127 380 Miscellaneous Gene Families AT2G29290 60.630 3.68e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05447 K08081 - gmx:100819646 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05454 3 68278652 68280582 Mepo3g05447 3 68209451 68211941 ECH
Mepo3g01621 3 24108145 24123037 Mepo3g05447 3 68209451 68211941 ECH
Mepo3g05447 3 68209451 68211941 Mepo3g05447 3 68209451 68211941 ECH