Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g01621 ATGGCAGAAACAAAGTTAAGCAGCTTCAAAGATCAAAGATGGTCACTCCAAGGAATGACAGCTCTAGTGACTGGTGGAACCCGGGGCATAGGGTATGCAATTGTGGAAGAGTTAGCAGAATTTGGGGCAAGTGTACACATAAGTGCACGTAATCAAGAAGATATTAACAAATGTTTGGAAGAGTGGAAAGGCAAAGGATTTTGTGTGACAGGGTCAACTTGTGATTTATTATTTCGGGACCAACGTGAAAAGTTGATGGAAACTGTTGCTTCTGTCTTCGATGGAAAACTCAATATTCTAGTAAACAATGCTGGGATATTTACTCCTAAACCCATCATAGATAATACTGATGAAGATATAACAACTACAATTGGTACCAATTTTGTGTCTGGTTACCATTTGTGTCAACTTGCACACCCACTTCTAAAAGAATCTGGATATGGAAGCATTGTATTCATATCCTCAATTGCAGGACTCAAAGCCTGGCCTTTTGCTTCTGTCTATGCAGCCTCTAAAGGAGCCATGAATCAATGCGCCAAGAACTTAGCATTGGAATGGGCAAAGGATAATATCCGTGCTAATGTTGTGGCACCTGGAGCTGTGATGACCATCCTTTTCGAGAATGCTGCGAAATTAACTGGCAGAGTGGATAACGTTATCGAGGATATGGTGTCTCTAACACCTAGTGGTCGGATTGGAGAACCTAAGGATATATCAGGATTGGTTGCTTTTCTTTGTCTTCCAGCTGCATCACACATCACTGGACAAATTATAGCTGCAGATGGAGGTTTCACCATTTAA 801 0.4132 MAETKLSSFKDQRWSLQGMTALVTGGTRGIGYAIVEELAEFGASVHISARNQEDINKCLEEWKGKGFCVTGSTCDLLFRDQREKLMETVASVFDGKLNILVNNAGIFTPKPIIDNTDEDITTTIGTNFVSGYHLCQLAHPLLKESGYGSIVFISSIAGLKAWPFASVYAASKGAMNQCAKNLALEWAKDNIRANVVAPGAVMTILFENAAKLTGRVDNVIEDMVSLTPSGRIGEPKDISGLVAFLCLPAASHITGQIIAADGGFTI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g01621 266 Pfam Enoyl-(Acyl carrier protein) reductase 27 265 - -
Mepo3g01621 266 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Mepo3g01621 266 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Mepo3g01621 266 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Mepo3g01621 266 PRINTS Glucose/ribitol dehydrogenase family signature 20 37 IPR002347 -
Mepo3g01621 266 PRINTS Glucose/ribitol dehydrogenase family signature 228 248 IPR002347 -
Mepo3g01621 266 PRINTS Glucose/ribitol dehydrogenase family signature 95 106 IPR002347 -
Mepo3g01621 266 PANTHER TROPINONE REDUCTASE 12 266 IPR045000 GO:0016491
Mepo3g01621 266 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 19 202 - -
Mepo3g01621 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 266 IPR036291 -
Mepo3g01621 266 FunFam Short-chain dehydrogenase reductase 5 266 - -
Mepo3g01621 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 IPR002347 -
Mepo3g01621 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Mepo3g01621 266 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Mepo3g01621 266 Gene3D - 3 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g01621 Mepo-Chr3 24108145 24123037 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g01621 11 266 Miscellaneous Gene Families AT2G29290 55.078 1.21e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g01621 K08081 - tpra:123892393 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g01621 3 24108145 24123037 Mepo3g01621 3 24108145 24123037 ECH
Mepo3g01621 3 24108145 24123037 Mepo3g05447 3 68209451 68211941 ECH