Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal8g1331 ATGGTATTGAAGAAGAGACTCGGTAATGGATTCAGGGGCAATCAGGTCCCTAAGGTACCTAGATGTCCAAGATCTGCAAGAAAGACGGTTCCGTTCAAGAAACCGACCGAAGATGGCAGCGGTTGTGCTTTTGAACTACTTGCAACTTTAGCCCAGGAGTTGTTGAAGGAGAGTGAAAGTTCTACTTCTAGCAATGCAACTGAAGTTAAACCGTTAACAGAAGAGCGATTTCGAAATGGAAGTTGTGAAGAAAAGACCAGTGAGAAACATCTCGAGATTGCTGGGACTGATTGTTTACTAGAATGCATTTCAGCTAACAATAATGTGAAGTCTGAAATTTTCAAATTGGAGAATAGGTTTGGAAATCATTCTAATACTAATAGATTAGTAGAAGTACCGAATGATCACGAGGCCGGCAGTTTAGGCTTCGAGCGATTATCTGCTGATGGTAAATTTAGTTTGAAGGAACCATTGAAATTAGGTTTTAATTCTCCTTCATTAGTCGACTTGAACGGTAACGGTAACGTTAAATCTCCATTTTGTGGGGAATTGTTTCCCAAAGCTTCCTTTAAGAGGAAGGGGAATGATATTAAGTTAGGTTTTATTGATGATGACGAAAACTTTATTAGGTGCAACAAAGTTTGCACCAAATCGAAGGCTTTTAAACCTTCACGATGCATTGCACGCAAAATAATCAGGAAGCGGTGGACTTCCAAACACTGGAAAGTTGCTCCAAAGTTGAAGGATTGTGAACATTCTCGATATGATAATAAAATGCATCCCTCGAGTCATAAGAGGAAGACTTATTACAATTTCGAAAGATCTCAGTGTTACACTCTTTCGAAGAGGAAGAAATTATCAGACAGGGGTTCAATGGTGACTCGTGGTGGAGAATTCAGCAGTGAGAGTGTATCTGATTCACCTAAGAAAGGAATTGGAGGAAATAACCGTAGCTCATCTGGAAAAGTTCGTGTTTCTAAGGATTCTCATGTCAAGTTTCGCATAGAGTCATTCAGGATTCCAGAACTTCACGTCGAGGTTCCTGAAACAGCAACTGTCGGTTCATTAAAGAGGACAGTCATGGAGGCAGTGATGACTATAATAGGAGGTGGAGTGCATGTTGGTGTTCTTGTTAAGGGGAAAAAAGTTAGAGACGACAACAGAACTCTTCGGCAGACTGGTATATCTTGTAAAGAAAATATAGATAAACTCGGTTTCGTGTTGGAGCCTAGCTCTTCTCAAGCTTCTCCAGTTGTTTGTGCTGGTGATCCTTCTCACTGTGAAGCATCTCAGCCTATCAGGTCTCTAGGAACTCCCTCCATAGATTCAGGGATTTCTGTTGCCAAACAGGATTCCTCCTTGCTTACAAATCCTGGCGGTGACCTTGTTGAAATGAACCATGAATCAGCTTCTTCCCTTGCTGACACTATATCTGATAAACTTGACACTGTATCTGATAAACTAACACAAAATTCCGGAGCGCTAGTTTCGGTTCCAGCTCATAGCACTGAGGCTTTAACTGCTGTTCCCGTTAATCAGAACACCGGACCCTCCGACTTTGTACAGCGTCGAACCAGGAGACCGTTTTCTGTGTCTGAAGTTGAAGCACTTGTTCATGCGGTTGAGGAAGTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGATGTTTTGAGAATGCAGACCATAGGACTTACGTAGACTTGAAGGATAAATGGAAAACTTTGGTGCACACTGCAAAAATCTCTCCTCAACAAAGGAGAGGACAGCCAGTTCCTCAGGAGCTATTGGATAGGGTTTTGGCTGCACATGCTTATTGGTCTATCCACCAAGCTAAGCATCATGTCAAGCATCAAACCAATGTTGTCCAACCACTTGTGATTATGTAG 1887 0.4208 MVLKKRLGNGFRGNQVPKVPRCPRSARKTVPFKKPTEDGSGCAFELLATLAQELLKESESSTSSNATEVKPLTEERFRNGSCEEKTSEKHLEIAGTDCLLECISANNNVKSEIFKLENRFGNHSNTNRLVEVPNDHEAGSLGFERLSADGKFSLKEPLKLGFNSPSLVDLNGNGNVKSPFCGELFPKASFKRKGNDIKLGFIDDDENFIRCNKVCTKSKAFKPSRCIARKIIRKRWTSKHWKVAPKLKDCEHSRYDNKMHPSSHKRKTYYNFERSQCYTLSKRKKLSDRGSMVTRGGEFSSESVSDSPKKGIGGNNRSSSGKVRVSKDSHVKFRIESFRIPELHVEVPETATVGSLKRTVMEAVMTIIGGGVHVGVLVKGKKVRDDNRTLRQTGISCKENIDKLGFVLEPSSSQASPVVCAGDPSHCEASQPIRSLGTPSIDSGISVAKQDSSLLTNPGGDLVEMNHESASSLADTISDKLDTVSDKLTQNSGALVSVPAHSTEALTAVPVNQNTGPSDFVQRRTRRPFSVSEVEALVHAVEEVGTGRWRDVKLRCFENADHRTYVDLKDKWKTLVHTAKISPQQRRGQPVPQELLDRVLAAHAYWSIHQAKHHVKHQTNVVQPLVIM* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal8g1331 628 Gene3D - 516 618 - -
Mal8g1331 628 ProSiteProfiles Myb-like domain profile. 521 576 IPR001005 -
Mal8g1331 628 SUPERFAMILY Homeodomain-like 527 607 IPR009057 -
Mal8g1331 628 CDD SANT_TRF 527 577 - -
Mal8g1331 628 MobiDBLite consensus disorder prediction 1 33 - -
Mal8g1331 628 MobiDBLite consensus disorder prediction 294 322 - -
Mal8g1331 628 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 522 580 IPR017930 -
Mal8g1331 628 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 627 IPR031105 -
Mal8g1331 628 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 627 - -
Mal8g1331 628 MobiDBLite consensus disorder prediction 288 325 - -
Mal8g1331 628 SMART sant 525 578 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal8g1331 Mal-Chr8 24985738 24989176 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal8g1331 - - mtr:MTR_5g080010 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g2849 2 37747285 37750508 Mal8g1331 8 24985738 24989176 ECH
Mal3g1943 3 80562833 80566958 Mal8g1331 8 24985738 24989176 ECH
Mal4g0539 4 5214303 5218018 Mal8g1331 8 24985738 24989176 ECH
Mal8g1331 8 24985738 24989176 Mal8g1331 8 24985738 24989176 ECH