Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0539 ATGGTGGCACATAAGAAGATAGATTATGGATTTGTTGGCTATCAGGTGCCAACTAAGCCGCGTGCCGCACGATCACCTAGGAAGAGGGATACATTTCAAAGAAGTGTGGAACATAATCAAATGTGTGCGATTGACTTATTGGCCACCGTAGCCGCCGGCACTTTATTGCAAGAGAAACAGAATCCAATCACACCCGGTGACGGATCATTGAAAAAAGATCAGCATGGATTCGTTAAAGAAGAGGGCCAAGGTGCAAATAAGCCATTCAAAGCTGAGCTTCCTGATGAAGCAAGTTGTGACCGAAGGCTTCAACATGGATTTGTTAATGAAGGGTTCCCGGATGCAAATAAGCCGTTGAAAGCTGAGCTTTCTGATGACGTAAGTAGTGACAGGAAATGTTTCTCTGCTCTTTCTTCGCAGGTGTACGATAAAAAATGCTGTTTGAAGGAAAATCCGCATCCTGAAATTGATGGTCATTCATGCATTGCTTCCATGGTAACAAGTTCTAGTTGCTCAGAGAGGTTAGTTGCTGACATTTTGGTGGATAGGAAAAGCCATAGTGAAATGAAAAATATTACTAGTAAAGTTGAATTAGGATCCTCTGGATATCCAGATTGTAGTGATTGCAACTTAGATGTTGATGTAAGTAAAGTAAAGGAGGAGCTACAAAAATCTGAAAAGGTCCCAATCGGTACTGCGACTGGAGCGTGCTGTTTTGAGGATCTAATGGATGAAAAACCTCTGGCGCCGGTCGGTTCAGGTGGCATTGCCAAGTTGTCGGGGTATGACAATAGCGTGCCTAGTAGCTCATTGTTCAAAGGTTGCGAAAATGTAACAGTAGTTAGTAGAGATGATGACGAAAACTTTTCAGGGTGTGCTCACCCTAGTTCGAAAACAAAGTCCTTTAGGTCAAAGACTTGTATAGGTGATCAAAGAATAAGGAAAAGATTGGCTTCTAAATATCGGAAAGTTGCTCGAGAGTCAAAGCACAATACACTTTCTAACAGTGCTGTGGATAGAAATTTCAACACAGTTTACAACAGTAGGATGAATTATCATAAACGCCAAATATCTCAAATGAATATTCCTTTCAAAAAGAGGAAGATTTTTGACTGCAGCTCCACTTCAAATTCTAATGGAAATATCAGAAGTGGTCGTACTTATTGTTCACCCAAGAACGACACGAATCAAGGCATTTCTTGTTCATCATCTCGGATGCGCAAAGATCCTGGAAAGTCATCCTTGGAAGTATACCGTCATTCTGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCGGAGCTTTTTATTGAGATTCCTGAAACTGCAACTGTCGCGTCCTTGAAGAAAGCAGTTATGGAAGCAGTGACTACGCTACTTCAAGGTGGATTGCGAGTTGGTATGATTCTCCATGGAAAGAAACTTAGAGATGACAGTAAAACTCTACTTCAATCTGGAATTTCTCATGATAACCAGCTGGATGCTTTGGGCTTCACCTTGGAGCCTAATTCTTCTCAAAGCCTACCACTCACATGTGCTAAAGATTCTCTTCAAGTTCCTACTGCAGACATGCCTCTATCTTTAATAGGGCATACTTCGAGTCCAGCTGTAATTCATCCGACTCCGATGATTCGGGGTTTCTCTGACGCTGAGCATCAAGTGAACAGTTTAGGTAACATTGTTGAAAGTGATCACGATTCAGCACCTTCTCCTATCAATACATTTGGTGAAAAAAGATTGATAGATTCCAAAGAACTTGTAACTATTCCTGAAATTGATACGGAGGGACTAGCTGTGCTACCAGTGGACCAGAAGCCAAAGCGAACTGAGATGTCACAACAACGTCGCCGAATTCGCAGGCCTTTTTCTGTTGCTGAAGTGGAAGCTCTGGTTGAAGCAGTTGAGAGACTTGGAACGGGAAGGTGGCGTGATGTTAAACTTCGCGCTTTTGATGATGCAAAGCATAGGACATATGTGGATTTGAAGGATAAATGGAAAACATTGGTACACACGGCAAGAATATCTCCTCAGCAAAGAAGAGGTGAGCCTGTTCCCCAAGAACTTTTGGATAGGGTCCTTACTGCTCATGCATATTGGTCCCAACGGCAACAAACTAAGCAACAACAACTCAAGCACCACCCTGAAACTTGCCTTCTACTTTAA 2184 0.4222 MVAHKKIDYGFVGYQVPTKPRAARSPRKRDTFQRSVEHNQMCAIDLLATVAAGTLLQEKQNPITPGDGSLKKDQHGFVKEEGQGANKPFKAELPDEASCDRRLQHGFVNEGFPDANKPLKAELSDDVSSDRKCFSALSSQVYDKKCCLKENPHPEIDGHSCIASMVTSSSCSERLVADILVDRKSHSEMKNITSKVELGSSGYPDCSDCNLDVDVSKVKEELQKSEKVPIGTATGACCFEDLMDEKPLAPVGSGGIAKLSGYDNSVPSSSLFKGCENVTVVSRDDDENFSGCAHPSSKTKSFRSKTCIGDQRIRKRLASKYRKVARESKHNTLSNSAVDRNFNTVYNSRMNYHKRQISQMNIPFKKRKIFDCSSTSNSNGNIRSGRTYCSPKNDTNQGISCSSSRMRKDPGKSSLEVYRHSALRSRDSHVKLRIKSFRVPELFIEIPETATVASLKKAVMEAVTTLLQGGLRVGMILHGKKLRDDSKTLLQSGISHDNQLDALGFTLEPNSSQSLPLTCAKDSLQVPTADMPLSLIGHTSSPAVIHPTPMIRGFSDAEHQVNSLGNIVESDHDSAPSPINTFGEKRLIDSKELVTIPEIDTEGLAVLPVDQKPKRTEMSQQRRRIRRPFSVAEVEALVEAVERLGTGRWRDVKLRAFDDAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQRQQTKQQQLKHHPETCLLL* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0539 727 SUPERFAMILY Homeodomain-like 627 708 IPR009057 -
Mal4g0539 727 MobiDBLite consensus disorder prediction 383 412 - -
Mal4g0539 727 CDD SANT_TRF 627 677 - -
Mal4g0539 727 ProSiteProfiles Myb-like domain profile. 621 676 IPR001005 -
Mal4g0539 727 MobiDBLite consensus disorder prediction 383 408 - -
Mal4g0539 727 Gene3D - 615 718 - -
Mal4g0539 727 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 621 680 IPR017930 -
Mal4g0539 727 SMART sant 625 678 IPR001005 -
Mal4g0539 727 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 727 - -
Mal4g0539 727 ProSiteProfiles Ubiquitin domain profile. 430 500 IPR000626 GO:0005515
Mal4g0539 727 SUPERFAMILY Ubiquitin-like 425 514 IPR029071 -
Mal4g0539 727 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 727 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0539 Mal-Chr4 5214303 5218018 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0539 - - gsj:114374220 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0539 4 5214303 5218018 Mal4g0539 4 5214303 5218018 ECH
Mal4g0539 4 5214303 5218018 Mal2g2849 2 37747285 37750508 ECH
Mal4g0539 4 5214303 5218018 Mal8g1331 8 24985738 24989176 ECH
Mal3g1943 3 80562833 80566958 Mal4g0539 4 5214303 5218018 ECH