Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1943 ATGATTATGCAGAAGAGGTTGGATTATGGTTTTAATGGCTATCAAGTTCCTTCCGTTCCTCGAGCTTCAAGATCTCCTAGGGGGAGGGGTACAATCAGGAAGAAACCTGACAGCAATCAGATTCAAGCGTTTGATATTTTGGCTAGTGTAGCTGGCAACCTTTTGCAGAAGAATCAGAGTTCGATTCCTGATAATGCTGCTTCTGCGAAAGATCCTTGCGCTTTTTCTGGTATTAACATAAAGGAAAACAAACAAGAGAATCAAGTAGGATCATTTAAGGAGGAGCAATTTGAGAATGGAACTTGCAGTGAAGTTGTCTCTGGATGTGTCCCTAGTTTGCAAGGGAAACATGAAAACCAAAGAGTCACGGGTGATACATCGTTTCATGACAATCATCTTGAAGGACAAGGACAGAATGTCATTGAGAGGGAAGATGAACGTGTGAAATTGAGAAGTACGAACGAGAAAATTATCCGCATCAAAAACCGATCTGATGGATTAATAGAACCAAGCCAAAGAGCATCAAAAGATTGCATTGCAGAAAATCATTTGGAGAAGCCTTCATTGGAAGGCCGCTGCCGCAGGAATTTTGATTCTTTACCGAATGGTTTCGGTACTACGAAATTAGTTAATACAGATGATGACGAAAACTTTGTTAGGTCCACTCAACTGAACTCAAAGAATAAGATATCTGGCTCACCACCAGATACAGTAAAGGTTAAGGATGCAAGTCCTTTTGTGAATGACGAGAACAATAGCGGGGACAATTCTGTGCTTGAAAATTCAGAAAGGATGTATCCATTTAAGAAAAGGAAGTTTATCTACCAAACCTCATCGTCTACGTCTGATAGTTGGTCTCACTGTCAAGGCACAGTTGATTCTTCTTGTACAAGGGTTAATGGCATGAATCACGGTGCAGTAATTGAAGAATCATCTTCTATAGCTGATCAAGAAGTTCATCCTGGATCCAAGGGTTGTAACGTGAAGCTTAGCATAAAATCCTTTAAAGTCCCAGAGCTTTTTATTGATATACCTGAAACTGCAACTATTGGTTCGCTGAAGAAGACAGTAATGGAAGCTGTGACAACTATACTTGGAGACGAACTGCATGTAGGCATCCTTCTTCAAGGGAAGAAGGTTCGAGATGACAGCAAAACTTTGATCCAAACCGGGATATCTCAAGATGACAAACGTCATAGGTTAGGGTTCATGTTGGAGCCAAGACATAATCGAATTTCATCTTCATACAATGAAGACCCTTGTTTCCTAACCACTGGTTCACGACCAAAACTTTCTAGGCAATCAACATCTTTAATGTTACAACAAGGAACATATAATGTATCTCGAGAACGTTCTACGGTCAAAATTGAAAATTGTGCTGAAGGTGATCTTAACGTGGTCTCCTCTCTAGGAGATTCTTCAGCTAACAACAATAACATGTCAAAGTGTCGAGCTCTGGTCACAGTTCCTGCCATTAACATGGATGCATTAGCTGTGGTCCCATACCGGCGTAAATCAGGGAATTCCGACTTTGGACAGCGCCGAATCAGGAGGCCATTTTCTGTTCTAGAAGTAGAAGCATTGGTTCAGGCTGTTGAAAAACTAGGAACTGGAAGGTGGCGTGATGTCAAACAGCGTGCTTTTGACAATGCAAAGCATCGAACTTACGTAGATTTGAAGGATAAGTGGAAGACATTGGTTCACACAGCAAGAATCTCTCCGCAGCAAAGGAGAGGAGAACCTGTTCCTCAAGAGCTTCTCGACAGAGTCTTAGCCGCTCATGCCTATTGGTCTCAACAACAATGCAAGCATCAATTTAAATCAATGTGA 1830 0.4142 MIMQKRLDYGFNGYQVPSVPRASRSPRGRGTIRKKPDSNQIQAFDILASVAGNLLQKNQSSIPDNAASAKDPCAFSGINIKENKQENQVGSFKEEQFENGTCSEVVSGCVPSLQGKHENQRVTGDTSFHDNHLEGQGQNVIEREDERVKLRSTNEKIIRIKNRSDGLIEPSQRASKDCIAENHLEKPSLEGRCRRNFDSLPNGFGTTKLVNTDDDENFVRSTQLNSKNKISGSPPDTVKVKDASPFVNDENNSGDNSVLENSERMYPFKKRKFIYQTSSSTSDSWSHCQGTVDSSCTRVNGMNHGAVIEESSSIADQEVHPGSKGCNVKLSIKSFKVPELFIDIPETATIGSLKKTVMEAVTTILGDELHVGILLQGKKVRDDSKTLIQTGISQDDKRHRLGFMLEPRHNRISSSYNEDPCFLTTGSRPKLSRQSTSLMLQQGTYNVSRERSTVKIENCAEGDLNVVSSLGDSSANNNNMSKCRALVTVPAINMDALAVVPYRRKSGNSDFGQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQFKSM* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1943 609 CDD SANT_TRF 518 568 - -
Mal3g1943 609 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 609 - -
Mal3g1943 609 SUPERFAMILY Ubiquitin-like 323 404 IPR029071 -
Mal3g1943 609 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 512 571 IPR017930 -
Mal3g1943 609 SMART sant 516 569 IPR001005 -
Mal3g1943 609 SUPERFAMILY Homeodomain-like 518 599 IPR009057 -
Mal3g1943 609 Gene3D - 506 609 - -
Mal3g1943 609 ProSiteProfiles Myb-like domain profile. 512 567 IPR001005 -
Mal3g1943 609 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 609 IPR031105 -
Mal3g1943 609 MobiDBLite consensus disorder prediction 223 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1943 Mal-Chr3 80562833 80566958 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1943 - - gmx:100807254 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1943 3 80562833 80566958 Mal2g2849 2 37747285 37750508 ECH
Mal3g1943 3 80562833 80566958 Mal8g1331 8 24985738 24989176 ECH
Mal3g1943 3 80562833 80566958 Mal3g1943 3 80562833 80566958 ECH
Mal3g1943 3 80562833 80566958 Mal4g0539 4 5214303 5218018 ECH