Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal7g5469 ATGGAGACAAGTAATGGTTCAAATTCCACCATTGGTGGCGGTGTTCGGGATGTTTACGGTGAGGATAGAGCCACTGAGGATCAGCTTGTTACTCCTTGGAGTGTTACTGTTGCTAGTGGATATACCTTGTTGAGAGATCCACATTTCAATAAAGGATTAGCCTTCACTGAGAAAGAGAGGGATGCACACTACTTGCGTGGTCTTCTTCCCCCAACTGTTATTTCTCAAGAAATTCAGGTAAAGAAAATGATCCAAAACATAAGACAGTATCAAGTTCCACTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGAGAAACGAAAGGCTGTTTTACAAGCTTCTTATTGAACATGTTGAGGAGTTACTCCCGGTTGTTTATACTCCAACAGTTGGTGAAGCTTGCCAGAAATACGGGTCCATCTTCATGCATCCGCAGGGTCTTTATATAAGCTTGAAAGAGAAAGGAAGGATTCTTGAAGTACTTCGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAGCGGATCTTGGGTCTTGGTGATCTTGGCTGTCAAGGGATGGGAATACCAGTAGGAAAACTTTCTTTATATACTGCACTTGGTGGAGTTCGTCCTTCTTCCTGCTTGCCTATTACCATTGATGTGGGTACAAACAATGAGGAGCTGTTGAATGAAGAATTATACATAGGGCTTAAACATCGACGAGCAACTGGGCAGGAATATGCTGAACTTCTCGATGAATTCATGACGGCATGCAAGCAAAATTACGGAGAAAAACTCCTCATCCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAGATATAGGTCAACACATCTTGTTTTTAATGATGATATTCAGGGAACTGCATCAGTGGTCCTCGCAGGAATAGTTTCGGCTCTAAATTTGGTTGGGGGAAGCTTGGACGATCACCGGTTCTTGTTCCTTGGTGCTGGAGAGGCAGGCACTGGAATAGCGGAACTCATTGCACTCGAAATATCAAAACGGACAAATTCCCCGCTGGATGAAGTGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGTTTGATTGTGAGTTCTCGCAAAGAATCACTTCAACATTTCAAGAAGCCATGGGCTCATGAACACGAACCTGTTGAGGAACTTGTAGATGCTGTTAATCAAATTAAGCCAACAGTGTTGATTGGAACATCGGGGCAAGGGAGAACTTTTACTCAGGATGTGGTCGAAGCGATGGCCTCTTTTAATGAGAAACCTGTTATTCTTGCTCTTTCAAACCCAACATCTCAGTCAGAATGTACTGCTGAAGAAGCTTATACATGGACCCAGGGACGTGCCATTTACGCTAGCGGTAGCCCGTTCGCCCCAGTTGAATATGATGGAAAAGTGTTTGTGCCTGGCCAGGCCAACAATGCATACATTTTTCCTGGATTTGGTCTCGGTTTAATAATGTCGGGTACCATCCGAGTGCATGATGACCTGCTTCTGGCAGCTTCTGAAGCTTTGGCTTCGCAGGTGACCCAGGAAGACTATGACAGGGGACTCGTATACCCGCCATTCACTAACATCAGAAAGATTTCGGCACACATTGCCGCTAAAGTGGCAACTAAGGCCTATGAGCTTGGCTTGGCAACTCGCCTTCCTCAACCAAAAGATTTGGTGAATTTTGCTGAGAGCTGTATGTATTCACCAACTTACAGAAGCTACCGGTGA 1740 0.4448 METSNGSNSTIGGGVRDVYGEDRATEDQLVTPWSVTVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTVISQEIQVKKMIQNIRQYQVPLQKYMAMMDLQERNERLFYKLLIEHVEELLPVVYTPTVGEACQKYGSIFMHPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEELLNEELYIGLKHRRATGQEYAELLDEFMTACKQNYGEKLLIQFEDFANHNAFDLLERYRSTHLVFNDDIQGTASVVLAGIVSALNLVGGSLDDHRFLFLGAGEAGTGIAELIALEISKRTNSPLDEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVEELVDAVNQIKPTVLIGTSGQGRTFTQDVVEAMASFNEKPVILALSNPTSQSECTAEEAYTWTQGRAIYASGSPFAPVEYDGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALASQVTQEDYDRGLVYPPFTNIRKISAHIAAKVATKAYELGLATRLPQPKDLVNFAESCMYSPTYRSYR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal7g5469 579 Gene3D - 38 292 IPR037062 GO:0004471
Mal7g5469 579 CDD NAD_bind_1_malic_enz 295 573 - -
Mal7g5469 579 PIRSF ME 13 579 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 ProSitePatterns Malic enzymes signature. 291 307 IPR015884 GO:0004471
Mal7g5469 579 Gene3D - 293 579 - -
Mal7g5469 579 PRINTS Malic enzyme signature 425 441 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 PRINTS Malic enzyme signature 266 284 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 PRINTS Malic enzyme signature 206 228 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 PRINTS Malic enzyme signature 291 307 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 PRINTS Malic enzyme signature 170 199 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 PRINTS Malic enzyme signature 110 134 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 PRINTS Malic enzyme signature 322 338 IPR001891 GO:0004470|GO:0004471
Mal7g5469 579 Pfam Malic enzyme, N-terminal domain 104 285 IPR012301 GO:0004471
Mal7g5469 579 SMART malic_2 104 285 IPR012301 GO:0004471
Mal7g5469 579 Pfam Malic enzyme, NAD binding domain 295 548 IPR012302 GO:0051287
Mal7g5469 579 SMART Malic_M_2 295 548 IPR012302 GO:0051287
Mal7g5469 579 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 295 578 IPR036291 -
Mal7g5469 579 PANTHER MALIC ENZYME-RELATED 8 579 - -
Mal7g5469 579 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 17 294 IPR046346 -
Mal7g5469 579 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 8 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal7g5469 Mal-Chr7 125706620 125711735 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal7g5469 K00029 - gmx:100785718 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g5469 7 125706620 125711735 Mal4g0330 4 2314479 2319517 ECH
Mal5g0209 5 3626254 3639145 Mal7g5469 7 125706620 125711735 ECH
Mal7g5469 7 125706620 125711735 Mal7g5469 7 125706620 125711735 ECH
Mal7g5469 7 125706620 125711735 Mal2g0648 2 7642054 7646585 ECH