Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0209 ATGCCGATCTTCTGGAACCACATGAAATCATCATCTTCTCCGTTATTTCAACGACTCAAACGCCACGTCACCACCGACGGTTACTTCATACTGTCGCGATCTTTCACTACGTTGGAAGGTCATCGTCCAACTATCGTTCATAAACGGAGTCTCGATATTCTTCACGATCCTTGGTTCAATAAAGGAACAGCCTTTTCCATGACAGAACGGGATCGTCTTGATCTACGAGGATTGCTTCCTCCAAATGTTGTGTCTCCTGAAGTGCAGATTGAGCGCTTCATGGTTGATCTGAAAAGGCTTGAAGTTCAAGCAAGAGATGGACCTTCTGATCCTAATGCACTGGCCAAGTGGCGAATACTAAACCGACTGCATGACAGAAATGAGACTATGTACTATAAAGTTTTGATTAACAACATTGAGGAATATGCACCAATAGTATATACTCCAACAGTGGGTCTTGTATGTCAGAACTATAGTGGGTTGTTTCGAAGGCCAAGAGGAATGTATTTCAGTGCTGAGGATCGTGGAGAAATGATGTCCATGGTCTATAACTGGCCAGCTGAGCAGGTCGATATGATTGTAGTTACCGATGGGAGCAGAATTCTGGGACTTGGAGATCTTGGAGTTCAAGGAATTGGCATTGCCATTGGGAAGCTTGATCTATATGTTGCTGCTGCTGGCATAAATCCTCAAAGAGTACTTCCCGTGATGATTGACGTTGGTACTAACAACAAAAAGTTGCTCGAGGATCCTTTATATTTAGGATTGCAGCAGCATCGGCTTGATGGGGATGACTATCTTGCTGTTATAGATGAATTTATGGAAGCTGTCTTTACTCGCTGGCCAAATGTGATTGTACAGTTTGAAGATTTTCAAAGCAAATGGGCTTTTAAGTTATTACAACGGTATAGAACTACCTACAGAATGTTTAATGATGATGTGCAGGGGACAGCTGGTGTTGCAATTGCCGGACTTCTAGGTGCTGTAAGAGCTCAAGGAAGGCCAATGATTGACTTCCCCAAGCAGAAGATAGTTGTTGCTGGTGCTGGAAGTGCTGGAATCGGTGTTCTTAATGCAGCAAGAAAAACAATGGCAAGGATGCTGGGTAATAATGAAGTAGCTTTTCAGAGTGCAAAAAGTCAATTTTGGGTTGTTGATGCAAAGGGATTAATCACAGAAGGACGTGAAAATATTGATCCAGATGCCCTTCCTTTTGCAAGAAATTTGAAAGAAATGGATCGCCAAGGACTAAGGGAAGGAGCAAGTCTTGCAGAAGTGGTCAAGCAAGTGAAGCCTGATGTCCTCCTAGGACTATCTGCTGTTGGAGGATTGTTCTCGAACGAGGTATTAGAGGCACTCAAGGGTTCAACGTCAACAAGACCAGCCATATTTGCCATGTCAAATCCAACAAAGAATGCTGAATGTACCCCTGACGAAGCATTCTCCATTTTGGGAGACAACATTATATTTGCAAGTGGAAGTCCGTTTAGTAATGTTGATCTAGGAAATGGTAATATTGGACACTGCAACCAGGGAAACAACATGTACCTGTTTCCAGGCATTGGTCTTGGAACTCTTTTGTCTGGCTCTAGGATCGTATCAGACGGCATGTTACAGGCTGCTGCTGAGCGTCTGGCTGCATATATGAGTGAAGAGGAGGTCCTCAAAGGGATTATTTTCCCTTCAATATCCAGAATTCGAGATATTACAAAGGAGATAGCTGCAGCTGTTATAGAAGAAGCTGTGGAGGAGGATCTAGCTGAAGGATATCATGAAATGGATGCTCGAGAGCTTCGCAAACTTAGTCGGGATGAAATTAAGGAATATGTGATTAATAACATGTGGAATCCAGAGTACCCAACACTAGTTTACAGGAAAGATTGA 1884 0.4305 MPIFWNHMKSSSSPLFQRLKRHVTTDGYFILSRSFTTLEGHRPTIVHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNVVSPEVQIERFMVDLKRLEVQARDGPSDPNALAKWRILNRLHDRNETMYYKVLINNIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDVGTNNKKLLEDPLYLGLQQHRLDGDDYLAVIDEFMEAVFTRWPNVIVQFEDFQSKWAFKLLQRYRTTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAARKTMARMLGNNEVAFQSAKSQFWVVDAKGLITEGRENIDPDALPFARNLKEMDRQGLREGASLAEVVKQVKPDVLLGLSAVGGLFSNEVLEALKGSTSTRPAIFAMSNPTKNAECTPDEAFSILGDNIIFASGSPFSNVDLGNGNIGHCNQGNNMYLFPGIGLGTLLSGSRIVSDGMLQAAAERLAAYMSEEEVLKGIIFPSISRIRDITKEIAAAVIEEAVEEDLAEGYHEMDARELRKLSRDEIKEYVINNMWNPEYPTLVYRKD* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0209 627 Pfam Malic enzyme, N-terminal domain 124 304 IPR012301 GO:0004471
Mal5g0209 627 Pfam Malic enzyme, NAD binding domain 314 581 IPR012302 GO:0051287
Mal5g0209 627 CDD NAD_bind_1_malic_enz 314 617 - -
Mal5g0209 627 Gene3D - 312 626 - -
Mal5g0209 627 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 31 313 IPR046346 -
Mal5g0209 627 PRINTS Malic enzyme signature 285 303 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PRINTS Malic enzyme signature 344 360 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PRINTS Malic enzyme signature 458 474 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PRINTS Malic enzyme signature 130 154 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PRINTS Malic enzyme signature 190 219 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PRINTS Malic enzyme signature 310 326 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PRINTS Malic enzyme signature 226 248 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 PIRSF ME 9 625 IPR001891 GO:0004470|GO:0004471
Mal5g0209 627 SMART Malic_M_2 314 582 IPR012302 GO:0051287
Mal5g0209 627 PANTHER MALIC ENZYME-RELATED 25 623 - -
Mal5g0209 627 Gene3D - 48 311 IPR037062 GO:0004471
Mal5g0209 627 PANTHER MALIC ENZYME 25 623 - -
Mal5g0209 627 SMART malic_2 124 304 IPR012301 GO:0004471
Mal5g0209 627 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 314 623 IPR036291 -
Mal5g0209 627 ProSitePatterns Malic enzymes signature. 310 326 IPR015884 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0209 Mal-Chr5 3626254 3639145 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0209 K00028 - gmx:100799344 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0209 5 3626254 3639145 Mal7g5469 7 125706620 125711735 ECH
Mal5g0209 5 3626254 3639145 Mal4g0330 4 2314479 2319517 ECH
Mal5g0209 5 3626254 3639145 Mal2g0648 2 7642054 7646585 ECH
Mal5g0209 5 3626254 3639145 Mal5g0209 5 3626254 3639145 ECH