Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g0648 ATGGCAACTGAGGATTTCGTGAACGGTGTTGGTGGTGGTGTTAAGGACCTCTATGGTGAAGATAGTGCTACAGAGGATCAACTTATCACACCATGGAATTTCTCTGTTGCTAGTGGATGCACTTTGCTGAGAGATCCACGCTACAACAAAGGACTTGCCTTCACTGAGAATGAAAGGGATGCTCATTATGTTCGTGGCCTTTTGCCTCCAGCTGTCTTCACTCAAGATCTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGATGTTCCTCTTCACAAGTACATAGCCTTGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTATGATCGATAATGTCGAAGAATTGCTACCTGTTGTTTACACTCCAACAGTTGGAGAAGCCTGCCAGAAATATGGAAGCATTTATAGGCGTCCTCAGGGTCTATATATAAGTTTGAAGGAGAAAGGCAAAATCCTTGAGGTGCTTAAAAACTGGCCAGAAAAGACTATTCAAGTTATTGTTGTGACTGATGGTGAACGTATTTTGGGACTCGGAGATCTTGGTTGCCAGGGAATGGGAATTCCTGTTGGAAAACTTTCTCTCTATACTGCATTAGGAGGTGTTCAACCTTCATCGTGTTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAATTTGCTGAATGATGAATTCTACATTGGCCTTAGACAGAAGAGAGCAACTGGGAAGGAATATGCGGAGCTTCTAGAAGAGTTTATGCATGCAGTTAAGCAGAACTATGGGGAGAAAGTTCTTGTACAGTTTGAAGATTTCGCCAATCATAATGCTTTCGATCTTCTGGATAAATACAGCTCATCTCATCTTGTTTTCAATGATGATATACAGGGTACAGCATCTGTGGTATTGGCAGGATTGCTTGCTTCCCTTAAATTAGTTGGAGGAACTTTAGCTGACCACACATTCTTATTCTTGGGAGCTGGAGAGGCTGGAACTGGTATAGCAGAGCTGATAGCTCTTGAGATTTCAAAACAGACAAAAGCTCCGGTTGAAGAGACTCGCAAGAAGATCTGGCTTGTGGACTCCAAGGGTCTTATTGTTAGTTCTCGTTTGCAATCCCTTCAACACTTCAAAAAGCCTTGGGCCCATGAACATGAACCTGTGAAGGAGCTTCTAAATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGTAGGAAAGACATTTACCAAGGAGGTTGTTGAAGCCATGGCATCCTTGAACGAGAAACCCCTCATTCTTGCACTTTCCAACCCAACTTCACAATCTGAGTGCACAGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATTTTTGCTAGTGGAAGCCCATTTGATCCTGTTAAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATTTTTCCCGGACTTGGTTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGACTGATATACCCTCCATTCACAAATATCAGAAAGATATCAGCCAACATTGCTGCTAGTGTTGCAGCTAAGACATACGAACTTGGTCTGGCTTCTCATTTACCTAGACCAAAGGATCTTGTCAAATACGCAGAAAGTTGCATGTACAGCCCAGGCTATCGAAGCTACCGTTGA 1737 0.4318 MATEDFVNGVGGGVKDLYGEDSATEDQLITPWNFSVASGCTLLRDPRYNKGLAFTENERDAHYVRGLLPPAVFTQDLQEKRLMHNLRQYDVPLHKYIALMDLQERNERLFYKLMIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKILEVLKNWPEKTIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVQPSSCLPITIDVGTNNENLLNDEFYIGLRQKRATGKEYAELLEEFMHAVKQNYGEKVLVQFEDFANHNAFDLLDKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLQSLQHFKKPWAHEHEPVKELLNAVKAIKPTVLIGSSGVGKTFTKEVVEAMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVKYEGKVFVPGQANNAYIFPGLGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFTNIRKISANIAASVAAKTYELGLASHLPRPKDLVKYAESCMYSPGYRSYR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g0648 578 PRINTS Malic enzyme signature 169 198 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PRINTS Malic enzyme signature 424 440 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PRINTS Malic enzyme signature 205 227 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PRINTS Malic enzyme signature 321 337 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PRINTS Malic enzyme signature 290 306 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PRINTS Malic enzyme signature 109 133 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PRINTS Malic enzyme signature 265 283 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 Gene3D - 292 578 - -
Mal2g0648 578 ProSitePatterns Malic enzymes signature. 290 306 IPR015884 GO:0004471
Mal2g0648 578 SMART malic_2 103 284 IPR012301 GO:0004471
Mal2g0648 578 PIRSF ME 15 578 IPR001891 GO:0004470|GO:0004471
Mal2g0648 578 PANTHER MALIC ENZYME 8 578 - -
Mal2g0648 578 Gene3D - 37 291 IPR037062 GO:0004471
Mal2g0648 578 SMART Malic_M_2 294 547 IPR012302 GO:0051287
Mal2g0648 578 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 22 293 IPR046346 -
Mal2g0648 578 CDD NAD_bind_1_malic_enz 294 572 - -
Mal2g0648 578 Pfam Malic enzyme, N-terminal domain 103 283 IPR012301 GO:0004471
Mal2g0648 578 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 294 577 IPR036291 -
Mal2g0648 578 PANTHER MALIC ENZYME-RELATED 8 578 - -
Mal2g0648 578 Pfam Malic enzyme, NAD binding domain 294 545 IPR012302 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g0648 Mal-Chr2 7642054 7646585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g0648 K00029 - gmx:100818219 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g0648 2 7642054 7646585 Mal2g0648 2 7642054 7646585 ECH
Mal5g0209 5 3626254 3639145 Mal2g0648 2 7642054 7646585 ECH
Mal7g5469 7 125706620 125711735 Mal2g0648 2 7642054 7646585 ECH
Mal4g0330 4 2314479 2319517 Mal2g0648 2 7642054 7646585 ECH