Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g0180 ATGGGTATTCCATTTTCTTTATTCCGATCCAACCAAACCGGTTCACCCGGTTCAACTTTAGGTGAATTACCGGAAAGTTGCGTCGCTTCAATCATCGGTTACATGGATCCTCCTCAGATCTGTCAACTCGCCACATTGAATCGAGCTTTTCGTGCTGCTTCTTCTGCTGATTTTGTTTGGGAATCCAAATTGCCGCCAAATTACCATCTTCTCCTCGCCAAAATCTTTCAAGATTTACCCATCAATTTGGGCAAAAGAGACATTTACGCTTCCCTTTGTCGCCTTAATACTATTGATAATGGAACCAAGAAAGTTTGGATTGATAAAGGCACGGGTAAGCTTTGTTTGGCCATATCAGGTAACAAGGGACTATCAGTACTTGGGATTGATGATAGGAGATATTGGAATTATATCATCACTGAAGAATCTAGATTCAGTACTGTTGCATACCTTCAGCATACCTGGTGGTTTGAAGTGGACGGTGAAGTTGACTTCCCATTTCCAGCCGGGACATATAGCTTATTCTTCAGAATACATCTAGGGCGAGCCTACAAGAGGTTTGGACGTCGGGTCTGCAACACCGAACATGTTCATGGATGGGACAAAAAGCCTGTGAGATTCCAACTTTGGACTTCAGATGGGCAATACGTTGCCTCCCAGTGTTTTCTGAAAGGAACTGGCAATTGGACTTTTTACCATGCTGGCGATTTCACGGTTGAGGATGGGAATTCATCAACCAAAGTCAAATTCTCTATGACTCAAATTGATTGCACACACACTAAAGGTGGTCTGTGTTTGGATTCTGCTTTTATTTACCCAAGCGAATTCAAAAAGAGCAAGTCATTTTTGAATTGCTCCCAGCCATTCAGGTAG 873 0.4273 MGIPFSLFRSNQTGSPGSTLGELPESCVASIIGYMDPPQICQLATLNRAFRAASSADFVWESKLPPNYHLLLAKIFQDLPINLGKRDIYASLCRLNTIDNGTKKVWIDKGTGKLCLAISGNKGLSVLGIDDRRYWNYIITEESRFSTVAYLQHTWWFEVDGEVDFPFPAGTYSLFFRIHLGRAYKRFGRRVCNTEHVHGWDKKPVRFQLWTSDGQYVASQCFLKGTGNWTFYHAGDFTVEDGNSSTKVKFSMTQIDCTHTKGGLCLDSAFIYPSEFKKSKSFLNCSQPFR* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g0180 290 PANTHER F-BOX PROTEIN PP2-A12 1 281 - -
Mal6g0180 290 Pfam Phloem protein 2 115 273 IPR025886 -
Mal6g0180 290 SUPERFAMILY F-box domain 15 89 IPR036047 GO:0005515
Mal6g0180 290 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
Mal6g0180 290 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g0180 Mal-Chr6 2593777 2596331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g0180 - - gmx:100788842 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g0180 6 2593777 2596331 Mal6g0180 6 2593777 2596331 ECH
Mal1g1996 1 26215195 26218036 Mal6g0180 6 2593777 2596331 ECH
Mal6g0180 6 2593777 2596331 Mal5g1497 5 28592799 28595295 ECH