Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g1497 ATGGGTGCTAATTTTTCATCATGTGTATGTGATGGAGATGGGGATTGCAGTTATATGAGGCCAAGGCTTGGGGATATACCTGAGAGTTGTGTAGCATTGGTGTTGATGTATTTAGATCCTCCGGATATATGTAGGCTAGCAAGATTGAATAGGGCGTTTCGTGATGCTTCATTTGCTGATTTTGTTTGGGAATCAAAGTTGCCTTTGAATTATGAGTTTATCATTGGAAAAGCTTTGGAGGATGATACTACGAACTCTGTTGCTGAATTGGGGAAGAGGGATATTTATGCTAGACTTTGTAAGCCTAATTTGTTTGACAATGGAACCAAGGAACTTTGGCTAGATAAGAGGACTGGTGGGGTTTGTTTGGCAATTTCTTCCAAAGCGTTAAGGATTACAGGGATAGATGATCGCAGATATTGGAATCACATTTCAACTGAAGAGTCAAGGTTCCATACAGTTGCTTATCTTCATCAAATTTGGTGGCTTGAAGTGGAAGGAGATATTGATTTCCAATTTCCACAAGGGACATACAGTGTGTACTTCAGACTTCACCTTGGCAGGTCATCCAAGAAGCTCGGTCGTCGAGTTTGTAAGACCGAGCACATTCATGGCTGGGATGTAAAACCTGCAAAATTTCAGCTGACGACTTCCGATGGTCAACACGCTGTATCCCATACTCATTTGGATAATCCAGGGCACTGGATCCTCTACCATGTAGGAAACTTTGTTTCTAAGAATTCGAATGATTTGATGAAGATCAAATTTTCATTAACTCAAATCGATTGTACTCATACCAAAGGTGGTTTGTGTGTAGACTCTGTGCTTATATACAATAGTAGTGATGTAAGAAAAGAAGTGTAA 864 0.4016 MGANFSSCVCDGDGDCSYMRPRLGDIPESCVALVLMYLDPPDICRLARLNRAFRDASFADFVWESKLPLNYEFIIGKALEDDTTNSVAELGKRDIYARLCKPNLFDNGTKELWLDKRTGGVCLAISSKALRITGIDDRRYWNHISTEESRFHTVAYLHQIWWLEVEGDIDFQFPQGTYSVYFRLHLGRSSKKLGRRVCKTEHIHGWDVKPAKFQLTTSDGQHAVSHTHLDNPGHWILYHVGNFVSKNSNDLMKIKFSLTQIDCTHTKGGLCVDSVLIYNSSDVRKEV* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g1497 287 SUPERFAMILY F-box domain 21 74 IPR036047 GO:0005515
Mal5g1497 287 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
Mal5g1497 287 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Mal5g1497 287 Pfam Phloem protein 2 121 278 IPR025886 -
Mal5g1497 287 PANTHER F-BOX PROTEIN PP2-A13 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g1497 Mal-Chr5 28592799 28595295 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g1497 - - gmx:100814033 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g1497 5 28592799 28595295 Mal5g1497 5 28592799 28595295 ECH
Mal6g0180 6 2593777 2596331 Mal5g1497 5 28592799 28595295 ECH
Mal5g3962 5 109182625 109183177 Mal5g1497 5 28592799 28595295 ECH