Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1996 ATGGGGGCTGGTATTTCTTCAACTGCATCTATAAGAGAAAAAAAGAATGAAGAGTCTAATTCTGCATCATCAAGAACGGGTCTTGGTGATATTCCAGAAAGTTGCATCTCTTCCATCCTCATGAATCTTGATCCACCTGATATATGCAAATTGGCTAGAGTCAACCGTGCTTTTCATAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTACCATCATGCTACAACTTTCTTGCTAATAAATTTCTTGGTGAAGAAAATCTTTCTACTATGACTAAGAAAGATGTTTACACAAAACTATGTCAGCCAAATAGCTTTGATGATGGTACCAAAGAAGTTTTGTTGGAGAAATGCAGTGGACAAGTTTGTTTGTTCATGTCATCGAAGTCTTTGAAGATAACTGGAATAGATGATAGAAGATACTGGATTTACATTCCAACTGAGGAATCCAGGTTTAAGAATGTGGCATATCTTCAACAAATGTGGTGGGTTGAAGTAGTAGGGGAGCTAGAGTTTGTATTCCCTGTGGGGAGTTACAGCATAACTTTCAGACTCCAATTGGGAAAGTCATCAAAAAGATTGGGCCGGCGTGTTTGCAACGTTGATCAAGTTCATGGCTGGGACATCAAGCCCGTTAGATTTCAACTCTCTACATCGGACGGCCAGCATTCGATCTCCGAGTGTTACTTGCATGGACCAGGAAATTGGGTCTATTACCATGTAGGAGATTTTGTGGTTGTAAAGCCCAATGAGCCCATAAAAATCAAGTTTTCCTTAGCTCAAATTGATTGTACTCATACCAAAGGTGGCCTATGCATAGATAGTGCAATTATTTGCCCAACTGAGTTTAGAGAAAGGCTCAAAAAATTATAG 876 0.3961 MGAGISSTASIREKKNEESNSASSRTGLGDIPESCISSILMNLDPPDICKLARVNRAFHRASSADFVWESKLPSCYNFLANKFLGEENLSTMTKKDVYTKLCQPNSFDDGTKEVLLEKCSGQVCLFMSSKSLKITGIDDRRYWIYIPTEESRFKNVAYLQQMWWVEVVGELEFVFPVGSYSITFRLQLGKSSKRLGRRVCNVDQVHGWDIKPVRFQLSTSDGQHSISECYLHGPGNWVYYHVGDFVVVKPNEPIKIKFSLAQIDCTHTKGGLCIDSAIICPTEFRERLKKL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1996 291 SUPERFAMILY F-box domain 14 84 IPR036047 GO:0005515
Mal1g1996 291 Gene3D - 13 120 - -
Mal1g1996 291 PANTHER F-BOX PROTEIN PP2-A15 1 290 - -
Mal1g1996 291 MobiDBLite consensus disorder prediction 1 26 - -
Mal1g1996 291 PANTHER F-BOX PROTEIN 1 290 - -
Mal1g1996 291 Pfam Phloem protein 2 123 281 IPR025886 -
Mal1g1996 291 ProSiteProfiles F-box domain profile. 25 71 IPR001810 GO:0005515
Mal1g1996 291 SMART fbox_2 31 70 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1996 Mal-Chr1 26215195 26218036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1996 - - gmx:100795463 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g1996 1 26215195 26218036 Mal6g0180 6 2593777 2596331 ECH
Mal1g1996 1 26215195 26218036 Mal1g1996 1 26215195 26218036 ECH
Mal6g2889 6 77291574 77294902 Mal1g1996 1 26215195 26218036 PCT