Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4322 ATGGATCGTTTTTCTACTACTACTACTATCCCTTTTGCATTACAAGGAGCCAAAGATGACATCACCATGCAACTTTCTTTGATTTGGAGTCAAATCAAAGCTCCATTGATTGTTCCGTTACTAAGAATATCAGTGTTTTTATGTTTGATAATGTCGGTGATGATGTTCATTGAGAGGGTTTATATGGGTGTTGTCATTACTCTTGTGAAGCTATTTGGAAGAAAACCTGAGAAACGTTACAAATGGGAACCAATTAAGGATGATATTGAGTTGGGAAACTCTTGTTACCCTATGGTTCTTGTTCAAATCCCCATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCTGCATGTGGACTTTCATGGCCTTCTGATAGGATCATTATACAAGTTCTTGATGACTCCACTGATCCAACAATCAAGGAGTTGGTGCAACTAGAATGCCAAAGATGGGCAAGCAAAGGAGTGAACATAAAGTATGAAGTTAGGGACAATAGAAATGGATACAAAGCAGGGGCTTTAAAAGAAGGAATGAAGCATAGTTATGTGAAACAATGTGATCATGTTGCAATATTTGATGCTGATTTTCAACCAGAGCCTGATTTCTTGTGGCGTACCGTGCCATTTATGGTGCACAATCCTGAAATTGGCCTTATTCAAGCTCGCTGGAAATTTGTGAATTCGGATGAATGTATGATGACCAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGCTTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCGCTGAATGAGGCTGGTGGGTGGAAGGATAGGACCACAGTTGAAGATATGGACTTAGCTGTTAGAGCTAGTCTCAAAGGATGGAAATTCTTATACTTGTCTAACTTGAAGGTTAAAAATGAATTGCCGAGTACTTTCAAGGCCTACCGTTATCAACAGCATCGTTGGTCTTGTGGACCAGCCAATCTTTTCAGAAAAATGGTTATGGAGATAATTAGAAACAAGAAAGTGTCCTTGTGGAAGAAGATACATGTAATTTACAGTTTCTTCTTTGTTCGGAAAGTCATAGCACACATCAATACGTTTGTGTTTTATTGCATTGTTCTACCTGCAACAGTTTTGGTACCTGAAGTTGCAGTGCCAAAATGGGGAGCTGTTTATATCCCTTCCGTTATCACTCTTCTCAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTTGTCTTTTGGATTCTATTTGAGAATGTCATGTCTCTACATAGAACAAAGGCAACTATTATTGGTCTACTTGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAGAAACTCGGAGATGCTCTCAAGGCTAAAGCAGGAACTAAAGCACTCAAGAAACCTCGATTCAGAATTGGCGACAGAATTCACTTGTTAGAGCTCGGTGTTGGAATGTACCTCTTCTTTATTGGCTGCTACGATGTTATGTTTGGGAAAAACCACTTCTTCATCTTCCTCTTTATCCAAGCATTTGCATTCTTTGTCATGGCATTTGGATATGTCGGAACCTTCGTTCCAAACTCCTGA 1602 0.4001 MDRFSTTTTIPFALQGAKDDITMQLSLIWSQIKAPLIVPLLRISVFLCLIMSVMMFIERVYMGVVITLVKLFGRKPEKRYKWEPIKDDIELGNSCYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDHVAIFDADFQPEPDFLWRTVPFMVHNPEIGLIQARWKFVNSDECMMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVMEIIRNKKVSLWKKIHVIYSFFFVRKVIAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKAKAGTKALKKPRFRIGDRIHLLELGVGMYLFFIGCYDVMFGKNHFFIFLFIQAFAFFVMAFGYVGTFVPNS* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4322 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 375 IPR029044 -
Mal3g4322 533 PANTHER - 1 532 - -
Mal3g4322 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 90 312 IPR029044 -
Mal3g4322 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 532 - -
Mal3g4322 533 CDD CESA_CaSu_A2 97 333 - -
Mal3g4322 533 Pfam Glycosyltransferase like family 2 98 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4322 Mal-Chr3 122605919 122611139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4322 1 532 Miscellaneous Gene Families AT5G03760 81.238 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4322 K13680 - gmx:100782772 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4322 3 122605919 122611139 Mal1g1928 1 25336600 25339727 ECH
Mal3g4322 3 122605919 122611139 Mal3g4322 3 122605919 122611139 ECH
Mal3g4322 3 122605919 122611139 Mal1g3217 1 50052330 50058657 PCT