Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3217 ATGGAGGTGTTTCAAGTAGCAAGTGAGGGTGTTGGTATGCAACTTGCGTTTATTTGGAGGAAAATCAGAGGACCATTGGTCGTGCCAATGATGAGAGTAGCCATGTTTATGTGCCTAGGCATGTCATTGATGATGTTTGTTGAGATAGTTTACATGGCGATTGTCATTTGTTTTGTGAAGTTGTTTGGTAGAAAACCAGAGAAGTGTTATAAATGGGAGCCTATTAAGGATGATGTTGAGTTAGGAAACTCTAATTACCCTATGGTTCTTGTCCAAATTCCAATGTACAATGAAAGAGAGGTTTATAAGTTATCAATTGGTGCTGCATGTGAACTCTTTTGGCCTTCTGATAGAATCATCATACAAATTCTTGATGATTCAACTGATCCAACAATCAAGGAGTTGGTACAGGTAGAATGCCAAAGATGGGGAAGTGAAGGTGTGAACATAAAGTATGAAGTTAGGGACAATAGAAATGGATACAAAGCTGGGGCTCTAAAGGAGGGAATGAAGCATAGCTATGTCATACAATGTGAATATGTAGCAATCTTTGATGTTGATTTTCAACCTGAACCTGATTTTCTCTGCCAAACCATTCCTTTCCTTGTCAATAATCCTGAAATTGGTCTCGTTCAAGCTCGCTGGAAGTTTGTGAATGTGAATGAATGTTTGATGACGAGGATGCAAAAGATGTCATTTGATTATCATTTTAGAGTTGAACAAGAAGTGGGGTCTTCTACTTACGCCTTCTTTGGCTTCAATGGGACTGCGGGTGTGTGGAGAATTTCGGCTCTGAATGAAGCTGGCGGGTGGAAAGATAGAACCACGGTTGAAGACATGGATTTGGCTGTACGTGCAAGTCTTAAAGGATGGAAATTCTTATACCTTTCCAATTTACAGGTTAAAAATGAATTGCCAAGTACTTTAGAGGCGTATAGATTCCAACAACATCGATGGTCATGTGGGCCAGCCAATCTTTTCAGGAAAATGTGTATGGAGATTCTCACAAACAAGAAAGTGACTTTATGGAAGAAGATACATATTGTATACAGTTTTTTCTTTGTTCGCAAGATTGTGGTCCATATAAACACATTTGTGTTATATTGCATTGTATTACCAGCAACTGTTATGGTGCCTGAGGTTGTGGTCCCTAAATGGGGAACTGTATATATCCCTTCCATCATCACCCTCCTAAATGCAGTTGGAACTCCAAGATCATTGCATTTAGTTGTTTTTTGGATTCTCTTTGAGAATACCATGTCTCTACATCGAACAAAGGCAACAATTATTGGTCTACTAGAGACTAGTAGAGTGAATGAATGGGTTGTCACTGAAAAACGTGGAAATGCTCTTGAGGGTGAAGGTGATAGTAAAGGACTGGAAAAGTTTCATTTTAAGATTGGAAACAGGATTTACATGGAAGAACTTTTTGTTGGATTCTACCTCCTCTTATGTGGCTGCTATGATCTTATGTATGGGAAAAATCACTACTTCATATTCCTATACATGCAAGCAATTGCTTTCTTCGTCCTGGCATTTGGATATGTTGGCACTTTTGTTCCCAACTCCTAG 1572 0.3899 MEVFQVASEGVGMQLAFIWRKIRGPLVVPMMRVAMFMCLGMSLMMFVEIVYMAIVICFVKLFGRKPEKCYKWEPIKDDVELGNSNYPMVLVQIPMYNEREVYKLSIGAACELFWPSDRIIIQILDDSTDPTIKELVQVECQRWGSEGVNIKYEVRDNRNGYKAGALKEGMKHSYVIQCEYVAIFDVDFQPEPDFLCQTIPFLVNNPEIGLVQARWKFVNVNECLMTRMQKMSFDYHFRVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLQVKNELPSTLEAYRFQQHRWSCGPANLFRKMCMEILTNKKVTLWKKIHIVYSFFFVRKIVVHINTFVLYCIVLPATVMVPEVVVPKWGTVYIPSIITLLNAVGTPRSLHLVVFWILFENTMSLHRTKATIIGLLETSRVNEWVVTEKRGNALEGEGDSKGLEKFHFKIGNRIYMEELFVGFYLLLCGCYDLMYGKNHYFIFLYMQAIAFFVLAFGYVGTFVPNS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3217 523 Pfam Glycosyl transferase family group 2 180 375 IPR001173 -
Mal1g3217 523 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 78 304 IPR029044 -
Mal1g3217 523 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN A1 1 522 - -
Mal1g3217 523 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 365 IPR029044 -
Mal1g3217 523 PANTHER - 1 522 - -
Mal1g3217 523 CDD CESA_CaSu_A2 87 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3217 Mal-Chr1 50052330 50058657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3217 2 522 Miscellaneous Gene Families AT5G03760 71.977 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3217 K13680 - gmx:100810016 881.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4322 3 122605919 122611139 Mal1g3217 1 50052330 50058657 PCT