Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1928 ATGGATAAGCTTTCATCAACAACTAGATTTGAAAGTGTGCATTATGGTATTGTAAACCAAATGAATTTCATTTGGCAACAAGCTAGAGTACCACTTATTGTTCCAGTGTTGAAATTGTTAGTCTTTTTGTGTTTGGCTATGTCAGTTATGCTTTTTGTAGAAAGAGTTTATATGGGTATAGTCATTCTTTTTCTTAAGTTGTTTGGTCATAAACCAGAGAAACATTACAAATGGGAGCCACTTAAGGATGTTGATATTGAGCTTGGAAACTCTGCTTTCCCTATGGTTTTGGTGCAAATCCCAATGTATAATGAAAAAGAGGTATATCAATTATCAATTGGAGCTGCATGTGGGTTATCATGGCCATCTGATAGAATTATTATTCAAGTTCTTGATGACTCAACAGATCCAATCATTAAGAATATGGTGGAGATAGAATGTGAGAGATGGAGAAGGAAAGGCATAAACATAAAGTATGAGATAAGGGAAAATAGAAATGGTTACAAAGCTGGTGCTCTTAAAGAAGGAATGAAGCATAGCTATGTCAAACTTTGTGACTATGTTGCCATCTTTGATGCTGATTTTCAACCTGAGTCTAACTTCCTTTACCGTACCATCCCATTCCTTGATCAAAATCCACAAGTTGGACTAGTTCAAGCTCGATGGCAATTCGTTAATGCCGATGAATGTTTAATGACAAGAATGCAAGAGATGTCATTGGACTATCATTTCCTTGTGGAACAAGAAGTTGGTTCCACAACTCATGCTTTCTTTGGTTTCAATGGTACTGCTGGTGTTTGGAGAATTTCAGCACTAAATGAAGCTGGTGGATGGAAGGACCGCACAACAGTGGAAGATATGGACTTAGCAGTACGAGCTAGTCTCAAAGGGTGGAAATTTGTGTACCTTAGTGACCTCAAGGTGAAAAGTGAATTGCCAAGTACATTCAAAGCCTACCGTTATCAGCAACACAGGTGGTCATGTGGCCCAGCTAATCTCTTCAGGAAAATGGCAATGGAAATAATAAGAAACAAGAAAGTGACCATGTGGAAGAAGTTTTATGTGATATATAGTTTTTTCTTTGTCCGGAAGATCATAGCCCATGTGGTCACATTTACATTCTACTGTGTCATTTTGCCTGCAACTGTTTTAGTTCCTGAAGTAGAAGTTCCCAAGTGGGGTGCTGTCTATATACCTTCTATTATTACACTCCTTAATGCTGTTGGAACTCCAAGGTCATTCCACTTAATAATATTGTGGATACTTTTTGAAAATGTTATGTCAATGCATAGGACCAAGGCAACACTTATAGGTTTGTTTGAGGCAGGTAGGGTAAATGAATGGGTAGTTACTGAGAAATTGGGTGATGCTCTTAAAATAAAATCAGGAGGTAAAGCAGCTAGAAAGCCTCGTATCGCGATCGATGGAAGGATTCATTTCCTAGAACTTGGTGTGGGAGCCTACCTCTTTTTGTGTGGATGCTATGATCTTGCCTTTGGGAAGAATCACTGCTATATATATCTTTTCCTGCAATCTATTGCCTTCTTTGTTGTGGGGGTTGGCTATGTCGGCATTTATGTTCCGAGATGTTAG 1593 0.3848 MDKLSSTTRFESVHYGIVNQMNFIWQQARVPLIVPVLKLLVFLCLAMSVMLFVERVYMGIVILFLKLFGHKPEKHYKWEPLKDVDIELGNSAFPMVLVQIPMYNEKEVYQLSIGAACGLSWPSDRIIIQVLDDSTDPIIKNMVEIECERWRRKGINIKYEIRENRNGYKAGALKEGMKHSYVKLCDYVAIFDADFQPESNFLYRTIPFLDQNPQVGLVQARWQFVNADECLMTRMQEMSLDYHFLVEQEVGSTTHAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFVYLSDLKVKSELPSTFKAYRYQQHRWSCGPANLFRKMAMEIIRNKKVTMWKKFYVIYSFFFVRKIIAHVVTFTFYCVILPATVLVPEVEVPKWGAVYIPSIITLLNAVGTPRSFHLIILWILFENVMSMHRTKATLIGLFEAGRVNEWVVTEKLGDALKIKSGGKAARKPRIAIDGRIHFLELGVGAYLFLCGCYDLAFGKNHCYIYLFLQSIAFFVVGVGYVGIYVPRC* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1928 530 SUPERFAMILY Nucleotide-diphospho-sugar transferases 91 372 IPR029044 -
Mal1g1928 530 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 86 313 IPR029044 -
Mal1g1928 530 PANTHER - 9 529 - -
Mal1g1928 530 Pfam Glycosyltransferase like family 2 95 329 - -
Mal1g1928 530 PANTHER BNAC09G36340D PROTEIN 9 529 - -
Mal1g1928 530 CDD CESA_CaSu_A2 94 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1928 Mal-Chr1 25336600 25339727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g1928 17 528 Miscellaneous Gene Families AT5G03760 77.193 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1928 K13680 - gmx:100797453 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4322 3 122605919 122611139 Mal1g1928 1 25336600 25339727 ECH
Mal1g1928 1 25336600 25339727 Mal1g1928 1 25336600 25339727 ECH