Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal6g2889 ATGGGGGCTAGTATATCTACCAATGATGATCATGAGGGATATCTTTCTTATTCAAAGACTTGTTTTGATGATATTCCAGAAAGTTGCATATCTTCCATGATGATGAAGTTGGATCCTCAAGAGATTTGTAAATTGTCTAGAGTGAACAAAACTTTTCATAGAGCTTCCTCTGATGACTATGTGTGGGAATCTAAGTTGCCTCCAAGTTACAAGTTTCTTGTCAAAAAAATTCTTGGTGAAGAAAAACTTTATTCAATGACCAAGAAAGAGATCTATGCTAAATTATGTCAGCCTAATTTCTTTGATGGTGGTACAAAAGAAATTTTGCTGGATAGATGCAGTGGACAAGTTTGTTTGTTCATTTCATCAAAATCTTTCAGGATTACTGGAATAGATGATAGAAGATATTGGAATTATATTTCCACTGAGGAATCCAGGTTTAAAAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGTTAGGGGAGCTAGAATTTGAGTTTCCAAAAGGGAACTATAGCATATTTTTCAAGCTTCAATTAGGCAAGACCACAAAGAGATTGGGACGAAGAGTGTGCAACCTTGAACAAGTACATGGTTGGGACCTCAAGCCCGTTAAATTTCAACTATCTACATCCGACGGTCAGAGTTCACTCTCACAATGTTATATGAATGGGACTGGAGAATGGGCCTACTACCATGTTGGAGACTTTGTCATTGAGAAGCCTAATGGGCCAATAAACATAAAGTTTTCTTTGGCCCAAATTGATTGCACACACACCAAAGGTGGTCTTTGCATAGATGGGGCAGTGATTTGTCCAAAGGATTTAGCACATAAGTTGAAACAATTTTAG 858 0.373 MGASISTNDDHEGYLSYSKTCFDDIPESCISSMMMKLDPQEICKLSRVNKTFHRASSDDYVWESKLPPSYKFLVKKILGEEKLYSMTKKEIYAKLCQPNFFDGGTKEILLDRCSGQVCLFISSKSFRITGIDDRRYWNYISTEESRFKSVAYLQQMWWVEVLGELEFEFPKGNYSIFFKLQLGKTTKRLGRRVCNLEQVHGWDLKPVKFQLSTSDGQSSLSQCYMNGTGEWAYYHVGDFVIEKPNGPINIKFSLAQIDCTHTKGGLCIDGAVICPKDLAHKLKQF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal6g2889 285 SMART fbox_2 25 65 IPR001810 GO:0005515
Mal6g2889 285 Pfam Phloem protein 2 117 275 IPR025886 -
Mal6g2889 285 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Mal6g2889 285 Gene3D - 15 101 - -
Mal6g2889 285 PANTHER F-BOX PROTEIN 1 285 - -
Mal6g2889 285 SUPERFAMILY F-box domain 18 84 IPR036047 GO:0005515
Mal6g2889 285 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal6g2889 Mal-Chr6 77291574 77294902 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal6g2889 - - gmx:100787859 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g2889 6 77291574 77294902 Mal1g1996 1 26215195 26218036 PCT