Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g1895 ATGGCGCCCAAGGGAGAGAAGAAGCCCGCTGAGAAAAAGCCCGCAGAGAAAACCAAAGCCGAGAAGAAGATCCCAAAGGAAGCATCATCCACCGACAAGAAGAAGAAGAGAAACAAGAAGAGCGTGGAAACCTACAAGATCTACATCTTCAAGGTTCTCAAGCAGGTTCATCCTGACATTGGGATCTCCAGCAAGGCTATGGGGATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTCGCTCAGGAATCTTCCAGACTCGCTCGTTACAACAAGAAACCTACAATCACCTCTCGGGAGATCCAGACTGCTGTTCGTCTCGTTCTCCCTGGTGAACTCGCTAAGCATGCCGTATCTGAAGGAACCAAGGCCGTTACCAAATTCACCAGCTCTTAA 399 0.4887 MAPKGEKKPAEKKPAEKTKAEKKIPKEASSTDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g1895 132 MobiDBLite consensus disorder prediction 1 40 - -
Mal1g1895 132 SUPERFAMILY Histone-fold 19 132 IPR009072 GO:0046982
Mal1g1895 132 PANTHER HISTONE H2B 5 132 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 Gene3D Histone, subunit A 4 132 IPR009072 GO:0046982
Mal1g1895 132 PANTHER HISTONE H2B 5 132 - -
Mal1g1895 132 SMART h2b3 35 131 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 ProSitePatterns Histone H2B signature. 100 122 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 PRINTS Histone H2B signature 45 63 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 PRINTS Histone H2B signature 103 116 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 PRINTS Histone H2B signature 86 103 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 PRINTS Histone H2B signature 116 129 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 PRINTS Histone H2B signature 64 84 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mal1g1895 132 Pfam Core histone H2A/H2B/H3/H4 6 108 IPR007125 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g1895 Mal-Chr1 24668321 24668719 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g1895 K11252 - han:110872404 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3391 3 110651676 110655223 Mal1g1895 1 24668321 24668719 ECH
Mal1g3917 1 79981413 79986042 Mal1g1895 1 24668321 24668719 ECH
Mal1g1895 1 24668321 24668719 Mal1g1895 1 24668321 24668719 ECH