Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g3391 ATGTGGGCTCTTCGTCGAGCTTCATTACCTCTCAGGAAGAGAGGTTTTAATGTTAGGGTTTCTAGTGTGAAGTTAATGCCAAATACTTGTGTTGAAGTTGAGGCTGCTGGGGTTTTTGATTCTCCGAAAATGGTTTGTGGTAAGTGTGGATTTCAATGTTATTGTTCAGGTTCGGGTTCAGGACATGGTTTTTTTAAATTTAGTTTGGGTAGATTAGGGTTTTCTTCGGAAGCCGGTGTGAAGAGTATGAAAGATGAGGATGATGATTTGGAGGAAGGGTTTTCGGAATTGGAGACGCCGGTGGATGAGGAAAGTGAAAAAGGGTTGGTTTCTGATAATGAGAGTGAGGAAGAGGAGATTGAGGTGCCACATAATGAGATGGAGTTGCCGTTATCGCATGATGTGGATGAGGTTTCGAAAAAGAAGAAATTGAGAAGAAGGGCTGATCCGGAACTGTTTAAAGCGATTATGGGTGCTCCGGGGCTTACTGTTCATACGGCTCTGGAGAAGTGGGTTGAAGAGGGGAAGGAACTGAGCAGAGAGGAGATTTCGCAGACTATGTATAATCTTCGGAAGCGGAAGATGTATGGGAGAGCTTTGCAGCTCTCGGAGTGGCTTCAGTCAAAAAAGCATCTTGAATTTGTTGAAAGGGATTATGCTTCCCAACTTGATTTAATTGCCAAATTGCATGGCCTACATAAGGCAGAAGCTTACGTTGAGAAAATTCCAGAATCTTTTAGAGGGGAGATAATATACCGAACTTTATTGGCTAACTGTGTTACTCAGAACAATTTGAAGAAAGCAGAGGAAATTTTTAACAAAATGAAGGATTTAGAGTTTCCTATTACAGAATTTGCGTGCAATCAGTTGCTCCTTCTGTATAAGAGGAATGACAGAAAGAAAATAGCTGATGTATTATTGCTGATGGAACAAGAGAATGTCAAACCTTCTCCTTTGACTTTTAAAATCTTAATAGATGCAAAAGGGAAGTCCAGTGATATTGATGGAATGGAACAAATTGTTGATAAAATGAAGGCTGAGGGTATAGAACCAGACATCCAAACAAAGGCAGTTTTGGTTGGGCATTACATCTCAGGTGGGCTTGATGATAAAGCTAAAGTACTGTTGAAGGAGATGGAAGGTGAAAACTTGAAGGAGAATCGGTGGGCATGTCGAATTTTGATTCCTCTCTATGCAAACTTGGGAATGGCAGATGAAGTGCAAAGAGTTTGGAAGGTCTGTGAGACACACCCTTGGGCTGAGGAGTGTGTGGCTGCAATTGAAGCCTGGGGAAAATTGAAGAAAGTTGATGAAGCAGAGGCAGTTTTTGAGATGATGGCAAGAAAATGGAGGCTTACGTCCAAGAACTGCTCAGTACTGCTGAAGGTTTATGCAAACAACAGGATGCTAACAAAGGGCAAGGAACTTATTAAGCGAATGTCAGATAGTGGGTGTCAAATAGGCCCGTTGACCTGGGATGCATTAGTGAAACTTTACGTTCAAGCAGGGGAAGTGGAAAAGGCAGATAGCATTCTGCAGAAGGCAATCCAGCAGACTCAGGTGAAGCCATTATTTTGTTCCTTTAACACTATTCTGGAGCAGTATTCTAAGAGGGGCGACATCCATAATACAGAAAAGATCTTCTATAGAATGAAACAAGCTGGTTATGTATCTCGACTAAGGCAGTACCAAATTCTTATAGAGGCCTATATGAAGGCCAAGGTTCCAGCTTATGGGATTAGGGACAGGTTGAAAGGAGATAATATATATCCCAACAGAGCTATGGCTAACATGTTGACTCAAGTTGATGGATTTAAGAAGACTCCAGCTTCCGATTTGCTTGATTGA 1848 0.4172 MWALRRASLPLRKRGFNVRVSSVKLMPNTCVEVEAAGVFDSPKMVCGKCGFQCYCSGSGSGHGFFKFSLGRLGFSSEAGVKSMKDEDDDLEEGFSELETPVDEESEKGLVSDNESEEEEIEVPHNEMELPLSHDVDEVSKKKKLRRRADPELFKAIMGAPGLTVHTALEKWVEEGKELSREEISQTMYNLRKRKMYGRALQLSEWLQSKKHLEFVERDYASQLDLIAKLHGLHKAEAYVEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEFPITEFACNQLLLLYKRNDRKKIADVLLLMEQENVKPSPLTFKILIDAKGKSSDIDGMEQIVDKMKAEGIEPDIQTKAVLVGHYISGGLDDKAKVLLKEMEGENLKENRWACRILIPLYANLGMADEVQRVWKVCETHPWAEECVAAIEAWGKLKKVDEAEAVFEMMARKWRLTSKNCSVLLKVYANNRMLTKGKELIKRMSDSGCQIGPLTWDALVKLYVQAGEVEKADSILQKAIQQTQVKPLFCSFNTILEQYSKRGDIHNTEKIFYRMKQAGYVSRLRQYQILIEAYMKAKVPAYGIRDRLKGDNIYPNRAMANMLTQVDGFKKTPASDLLD* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g3391 615 MobiDBLite consensus disorder prediction 109 123 - -
Mal3g3391 615 Pfam Pentatricopeptide repeat domain 477 537 IPR002885 -
Mal3g3391 615 Gene3D Tetratricopeptide repeat domain 423 611 IPR011990 GO:0005515
Mal3g3391 615 Pfam PPR repeat 427 449 IPR002885 -
Mal3g3391 615 PANTHER OS01G0280400 PROTEIN 54 615 - -
Mal3g3391 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 488 523 IPR002885 -
Mal3g3391 615 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Mal3g3391 615 TIGRFAM PPR: pentatricopeptide repeat domain 320 353 IPR002885 -
Mal3g3391 615 TIGRFAM PPR: pentatricopeptide repeat domain 527 557 IPR002885 -
Mal3g3391 615 TIGRFAM PPR: pentatricopeptide repeat domain 457 486 IPR002885 -
Mal3g3391 615 TIGRFAM PPR: pentatricopeptide repeat domain 251 281 IPR002885 -
Mal3g3391 615 PANTHER OS12G0527900 PROTEIN 54 615 - -
Mal3g3391 615 Pfam Pentacotripeptide-repeat region of PRORP 252 413 IPR033443 -
Mal3g3391 615 MobiDBLite consensus disorder prediction 98 127 - -
Mal3g3391 615 Gene3D Tetratricopeptide repeat domain 282 422 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g3391 Mal-Chr3 110651676 110655223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g3391 155 555 EF-hand Containing Proteins AT1G02150 23.741 7.24e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g3391 - - mtr:MTR_7g089770 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g3391 3 110651676 110655223 Mal1g1895 1 24668321 24668719 ECH
Mal3g3391 3 110651676 110655223 Mal3g3391 3 110651676 110655223 ECH