Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2416 ATGGCAGATCAAGGTGTCTTTCTGAGCAAAAGCAAAGGTTTTGGTGGCGGAACAAGGGAGGAAAGAGATTTCGATGAAGATCTGTGGGGTGTTGTAGCCAAGGAAAGGAATGATTTTGGCCCAAAAATCACAAGAAATTTTCCAAGGGCTAAAACATCATCCACTTCTGATTCCCCTTTGGCTCACAAATCTTCAGCACCTGTGGACATTCCTGACTGGTCAAAAGTTTACGGGAAAAATTGCATGAAGGGTTCAAGGGATGGTGGTGTAAGCCACAACGGTGATGAAGGTGATGATGAGGATGATGATGATATGGTTCCTCCACATGAATGGCTTGCTAGGAAGCTTGCAAGGAGCCAGATTTCATCTTTCTCTGTGTGTGAGGGAATGGGAAGGACCCTGAAAGGCAGAGATCTTAGCAAAGTGAGGAATGCTGTTTTGACCAAAACTGGCTTCATAGAGTAG 465 0.4495 MADQGVFLSKSKGFGGGTREERDFDEDLWGVVAKERNDFGPKITRNFPRAKTSSTSDSPLAHKSSAPVDIPDWSKVYGKNCMKGSRDGGVSHNGDEGDDEDDDDMVPPHEWLARKLARSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2416 154 PANTHER OS07G0512250 PROTEIN 21 154 - -
Lja6g2416 154 MobiDBLite consensus disorder prediction 40 67 - -
Lja6g2416 154 MobiDBLite consensus disorder prediction 1 21 - -
Lja6g2416 154 MobiDBLite consensus disorder prediction 81 107 - -
Lja6g2416 154 MobiDBLite consensus disorder prediction 47 62 - -
Lja6g2416 154 Pfam Senescence regulator 46 154 IPR007608 -
Lja6g2416 154 PANTHER EXPRESSED PROTEIN 21 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2416 Lja-Chr6 53015718 53016182 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2416 - - gmx:100796416 180.644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2416 6 53015718 53016182 Lja6g2416 6 53015718 53016182 ECH
Lja6g1390 6 39265709 39267583 Lja6g2416 6 53015718 53016182 ECH
Lja6g2416 6 53015718 53016182 Lja4g4259 4 76113750 76114331 ECH