Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4259 ATGGCAGATTGGGGTAGTTTTCTCAACAAAAGCAGTGGTTCAGGTGGGGGATCAATGAGGAATGAAGATTTTGATGAAGAAGAATTATGGGGTGTGAAAAAGGAGAGGGATTGTTTAATCCCAGCCACAAGGGTATCCAAGGATTCCTCTGGTTCTTCTGCATGGCTCATACCAACTTCTCCAAGAAAGATTCCAAGGGCTACTAGCATTACACATGCAAATGTGGTTCAAGGGTCCTCGCCCTCGGTACCTGTAGACATTCCTGACTGGTCAAAAATTTATGGGATGAATGGCCAAAAAGGGTCTAGGAATGGTTCATTGGCTGATGTTGGAGAGGGTGTAAGCAACAAGGGAGATTGTGTTTATGGAGATCATTACCATGATGATGGTGGTGATGATGATGATGGTGAGGATGGGGATAAGGATGATATGATTCCTCCCCATGAATGGATTGCAAGGAAACTTAAAAGGAGCCAGATTTCATCTTTTTCTGTTTGTGAAGGGATGGGGAGGACACTTAAAGGGAGAGATCTCAGCAAAGTGAGAAATGCTGTTTTGACCAAAACTGGTTTCATAGAGTAG 582 0.4364 MADWGSFLNKSSGSGGGSMRNEDFDEEELWGVKKERDCLIPATRVSKDSSGSSAWLIPTSPRKIPRATSITHANVVQGSSPSVPVDIPDWSKIYGMNGQKGSRNGSLADVGEGVSNKGDCVYGDHYHDDGGDDDDGEDGDKDDMIPPHEWIARKLKRSQISSFSVCEGMGRTLKGRDLSKVRNAVLTKTGFIE* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4259 193 MobiDBLite consensus disorder prediction 1 24 - -
Lja4g4259 193 Pfam Senescence regulator 39 193 IPR007608 -
Lja4g4259 193 MobiDBLite consensus disorder prediction 122 145 - -
Lja4g4259 193 PANTHER OS07G0512250 PROTEIN 14 193 - -
Lja4g4259 193 PANTHER EXPRESSED PROTEIN 14 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4259 Lja-Chr4 76113750 76114331 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4259 - - aprc:113847675 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4259 4 76113750 76114331 Lja4g4259 4 76113750 76114331 ECH
Lja6g2416 6 53015718 53016182 Lja4g4259 4 76113750 76114331 ECH