Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1390 ATGGAGGATAAATATAGTCTATTTAGGCAAAGAAGTGAGATATGGAGATCCTTGAGAGATGGAGACTTTGAAGAAGAAGAAGTATGGGATGTTTACAAAGACAGAGCTGATATTTATGTTTCTGAAGTTCACAAGACCAGGGACAAGGATCAATCCTCTCCTCTTGCTATCCCTAGGTCCCTGCCAGCTGCAGCAAGAATGATCCCAAGAACTAGCAGTGGAAATAGCAGTGCTAGTTCCTCCCATGAAGCAAAGGTTCTTCAGCAATCAGTACCTCTCAACATTCCTGATTGGTCTAAGATTTACAGGAATCAGCAAAAGAAGAACCCCAAGAATGTTTCAAGGTTTGATGATTATGATTACTGCCATTCTGTTGCTGATGAAGATGATGGTGATGGTGTTGTCAATTATGGAGGAGAAAGTGATAATGATGATGATGATGAAGAAGGAGAAGATGATGAGTATGATGCAAAGCTCCCACCCCATGAATTTATTGCAAGAAGGCTTGCCAGGAGCCAGATATCCTCATTCTCAGTCTTTGAAGGTGTTGGGAGGACACTCAAAGGTAGGGATCTTAGCAAAATGAGGAATGCTGTCCTCACAAAAACTGGATTCCTTGAATCACTCTGA 630 0.4175 MEDKYSLFRQRSEIWRSLRDGDFEEEEVWDVYKDRADIYVSEVHKTRDKDQSSPLAIPRSLPAAARMIPRTSSGNSSASSSHEAKVLQQSVPLNIPDWSKIYRNQQKKNPKNVSRFDDYDYCHSVADEDDGDGVVNYGGESDNDDDDEEGEDDEYDAKLPPHEFIARRLARSQISSFSVFEGVGRTLKGRDLSKMRNAVLTKTGFLESL* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1390 209 PANTHER EXPRESSED PROTEIN 1 207 - -
Lja6g1390 209 MobiDBLite consensus disorder prediction 44 88 - -
Lja6g1390 209 PANTHER CYTOSKELETON-REGULATORY COMPLEX PROTEIN END3, PUTATIVE ISOFORM 9-RELATED 1 207 - -
Lja6g1390 209 MobiDBLite consensus disorder prediction 126 158 - -
Lja6g1390 209 MobiDBLite consensus disorder prediction 69 88 - -
Lja6g1390 209 Pfam Senescence regulator 22 207 IPR007608 -
Lja6g1390 209 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1390 Lja-Chr6 39265709 39267583 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1390 - - gmx:100788195 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1390 6 39265709 39267583 Lja6g2416 6 53015718 53016182 ECH
Lja6g1390 6 39265709 39267583 Lja6g1390 6 39265709 39267583 ECH
Lja6g1390 6 39265709 39267583 Lja6g1390 6 39265709 39267583 PCT