Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2283 ATGGACTCCGATTCTTGGAACTCAACCCCTCGCCACTCAACCTCTTCTTCCCGCCGCTACCATTCCCGATCAGATCTGTATCTTGAAGACGCCGCCGCCTCCGATGATCTCAGGCCGGAGTATCTCTGCCCTTTCTGCGCCGAAGATTACGACGTCGTTTCGCTTTGTTGCCACATTGACGAACAACACCCTCTCCAAGCCAACACTGGGGTGTGTCCGGTTTGCGCAAAAAAGGTTGGAATGGATCTTGTTACACATCTTACTACGCAACATGGGAGTTTTTTAAAAGTGCAGCGTAAAAGGAGGGTCAAGAAAGGAGGCCCTGGTTCAACATTGTCAATGTTGAGAAAAGAGTTGCGAGAAGGAGCCCTGCAGTCCCTTCTTGGAGGGTCTTCGTACATGGCTTCCTCCAACTCCGAGCCTGATCCACTTTTGTCATCATTTATTTTTAACCCAGTACTAGCTGATGAATCTCTGAGTGCACGACCTTGCCCTTCCATTGAAACTGCCTCAGTAAAAGAAAGCTCAAAAGATGATTTCTTGGAAAGAAAACCTCAGAAGTTACAGATGTCAGACGAGGATCAAGCAGAGAAGGCTCGGAGGTTTGATTTTGTGCAAGGGCTGTTGATGTCCACCATTTTGGATGATAAATTATAA 657 0.4749 MDSDSWNSTPRHSTSSSRRYHSRSDLYLEDAAASDDLRPEYLCPFCAEDYDVVSLCCHIDEQHPLQANTGVCPVCAKKVGMDLVTHLTTQHGSFLKVQRKRRVKKGGPGSTLSMLRKELREGALQSLLGGSSYMASSNSEPDPLLSSFIFNPVLADESLSARPCPSIETASVKESSKDDFLERKPQKLQMSDEDQAEKARRFDFVQGLLMSTILDDKL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2283 218 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 216 IPR033347 -
Lja6g2283 218 MobiDBLite consensus disorder prediction 1 20 - -
Lja6g2283 218 MobiDBLite consensus disorder prediction 1 15 - -
Lja6g2283 218 MobiDBLite consensus disorder prediction 170 196 - -
Lja6g2283 218 Pfam Stress-induced protein Di19, C-terminal 112 213 IPR027935 -
Lja6g2283 218 Pfam Drought induced 19 protein (Di19), zinc-binding 40 92 IPR008598 -
Lja6g2283 218 MobiDBLite consensus disorder prediction 172 196 - -
Lja6g2283 218 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2283 Lja-Chr6 51790671 51793248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2283 - - gmx:100499917 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2283 6 51790671 51793248 Lja6g2283 6 51790671 51793248 ECH
Lja6g2283 6 51790671 51793248 Lja5g1397 5 13996907 14000570 ECH
Lja6g2283 6 51790671 51793248 Lja1g0404 1 3564521 3568455 ECH