Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0404 ATGTCAATGGAAGGCGAGGATTTGAGCTTTGGTCTCTCCACTGCTTCTAGAACCCACCGATCGAGGCTAAAGTCACACTTTGAGCTCTTTGTTGATTTTGAGGAGGATGAGGTAATTGGGGATGATGATGACGATGATGATGAGTTAAGGACGGCTTATCCATGCCCGTTTTGTGAAGAGGATTTTGATCTTCTAGAGCTATGTTGCCATATTGACTTGGACCATCAAATAGAAGCCAAGTCTGGGGTGCAGCTTTGTCCTGTTTGTGCCGTGTGGATAGGGGCAAATATGGTTGAGCACATAGCAGCACAACATGGAAACATATTTAAGAGTCAACTCAAATCAAAACGCCACCAGCATGATTCCTACCCAACTCTTTCCTTTTCAAGAAAGGATGAAGAGGATAGACACTGGGAATCTTTTTATGCTGGGTCATCTCCTGTGACGTCTACCTCCGAGACAGCGCGTGATCCATTGCTATCATTTTTATGTGGTGCAGCTGCTGCTGGTGAACACCAAAATGTGCAGCCTGATTCTTCAAGTGAATTAAGCATTGAAGAAACACATTCAGATGATACAGTGTTAGAAAGGTATGAAGTATCACTCTGTCTTTTTTTTGTCTTTGACTCGATATCCACTCCACACACATGTAGCTGTTCCTGTGGGACTAGTCTCCAGGTCTCCCCAAAGCGGTGA 696 0.444 MSMEGEDLSFGLSTASRTHRSRLKSHFELFVDFEEDEVIGDDDDDDDELRTAYPCPFCEEDFDLLELCCHIDLDHQIEAKSGVQLCPVCAVWIGANMVEHIAAQHGNIFKSQLKSKRHQHDSYPTLSFSRKDEEDRHWESFYAGSSPVTSTSETARDPLLSFLCGAAAAGEHQNVQPDSSSELSIEETHSDDTVLERYEVSLCLFFVFDSISTPHTCSCSCGTSLQVSPKR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0404 231 PANTHER PROTEIN DEHYDRATION-INDUCED 19 3 195 IPR033347 -
Lja1g0404 231 Pfam Drought induced 19 protein (Di19), zinc-binding 52 106 IPR008598 -
Lja1g0404 231 PANTHER DROUGHT-INDUCED PROTEIN 3 195 - -
Lja1g0404 231 Pfam Stress-induced protein Di19, C-terminal 126 198 IPR027935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0404 - - gmx:100527153 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0404 1 3564521 3568455 Lja5g1397 5 13996907 14000570 ECH
Lja1g0404 1 3564521 3568455 Lja1g0404 1 3564521 3568455 ECH
Lja6g2283 6 51790671 51793248 Lja1g0404 1 3564521 3568455 ECH