Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1397 ATGGACGCTGATTCCTCTTGGACTGCTCGTCTCTCTTCTGCCTCCAGGCGCTATCAATCCGCTCTCCAATCTCGATCAGATATGTTCATGGGTTTTGATGAAAATGATGTGGACGATGACGTAAGGGAGGAGTTTCTATGCCCCTTTTGTTCGGAGTATTTTGATATCGTTGGATTGTGCTGCCACATTGATGAAGAGCATCCAATGGAGGCGAAGAATGGGGTATGTCCAGTTTGTGCATCGAGGGTGGGGGTTGATATGGTAGCGCACATTACCCTACAACATGGAAATATATTTAAGATGCAGCGCAAAAGGAAATCACGTAAAGGTGGGTCTTATTCAACGCTATCATTATTGAGGAAGGAACTGCGAGAAGGAAATTTGCAATCCCTTTTTGGTGGGTCTTCGTGTATAGTGTCCTCATCTAATTCTGCAGCTGATCCACTGTTGTCGTCGTTTATATCGCCTTTAGCTAATGAACCTACCAGTTCTCAGCCTCATTTGCACACTGAGACAAGATCAACCAAGAAAAGCTTGGATGAGACTGTATCAAAAAGGAATGTGGAGACACCAACCTTGTCAGACAAAGATAAGGAGGAGAATGCAAAAAGATGTGAGTTTGTTCAAGGTATGTTGCTGTCCACCATGTTGGATGACGACTTATGA 666 0.4414 MDADSSWTARLSSASRRYQSALQSRSDMFMGFDENDVDDDVREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCASRVGVDMVAHITLQHGNIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSSCIVSSSNSAADPLLSSFISPLANEPTSSQPHLHTETRSTKKSLDETVSKRNVETPTLSDKDKEENAKRCEFVQGMLLSTMLDDDL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1397 221 MobiDBLite consensus disorder prediction 157 201 - -
Lja5g1397 221 Pfam Stress-induced protein Di19, C-terminal 116 216 IPR027935 -
Lja5g1397 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 219 - -
Lja5g1397 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 219 IPR033347 -
Lja5g1397 221 MobiDBLite consensus disorder prediction 170 201 - -
Lja5g1397 221 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1397 Lja-Chr5 13996907 14000570 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1397 - - gmx:100790197 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0404 1 3564521 3568455 Lja5g1397 5 13996907 14000570 ECH
Lja6g2283 6 51790671 51793248 Lja5g1397 5 13996907 14000570 ECH
Lja5g1397 5 13996907 14000570 Lja5g1397 5 13996907 14000570 ECH