Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g2022 ATGGAGAAGATGATGCCTAGAGAAGAAGGGTTCCCACAAAGGAGAAGAACCCCATCCTTCTCCTCCACACTCCTAGACGCCATTTGTCGCTCCATCGATGAATCAAAATCCAACGTGGATGAAGATCCACAACTGGGTCTCTTCAATGAAACTACCAACCCAAAACAGAGCATTTCAAAACAGAGCAATTCAACCCACTGTGCCAATATTGCAGAGAAAAGTGGCAACAAGGAGAGGATGAATCTTCGCCGTGCCGTGATGATTGAAGATTGGATGGAGAAGCAGAGCTCATCACAAAGCTCGCACTTCACAACTTCAAGCTCCTCTGAATCCACTTCAGGGGCAGGGTTTTCATCCTCAGAAGCAGAGACAACCACCCACAAATCAAAACCAAGACACAAATCAGAGAAGAAACAACAACAGCAGCAACCGCAGAAGCCGAAGAGGGAGGGTGACGGTGGTGGAGGTGGTGGTTTTTCGAGGACCAAGTTGAAGGCATTGAAAATCTATGGTGAGTTGAACCAGAAAGTGAAGCAACCAATTTCACCGGCGAGTCGCATAGCAAGTTTCCTCAGCTCAATTTTCAACGCCGGGAACATGAAGAAAGCCAAAATGTGCTATGCTGGTTCCACACAAGATGTTGATTTCAACCACAAATCCAAGTCCCCATGTTTCTCTTCCTCTGCATCTTCTTTTTCAAGAAGGTCTTGCATGAGCAAAACCCCAACTTCTTCATCTTCTTCCTCAGCAAAAGGGAAAAGATCAGTGAGATTCTACCCAGTTAGTGTGATCCTTGGTGAGGATTCTCAAAACGATCCAAGTTTGTTGCCAGTTTCTAGTGTTAGAAAGATGACAAGAGTGTCTTCAATTAAGGAGGTGAAGAAGAATTCTGCTAAGGTTAAAGAAAATGTTCTTATGAAGGGTTATCAAAATTCTTGTAAGAATAATCAATTTGATTTTAGAGGTTCCTATGATCATGGTGAGGAGAGTGATGATGATGATGATGATGATGCTCTAAGTTGTTCAAGTTCTGATCTGTTTGAGCTAGATCACATAGTTGGAGCTGGAAGATACCAAGTGGAGCTTCCTGTTTATGAAACTACAAATTTAGAAAGGAATAAGGCCATTGCTAATGGTCTTTGTTTGTAG 1149 0.4299 MEKMMPREEGFPQRRRTPSFSSTLLDAICRSIDESKSNVDEDPQLGLFNETTNPKQSISKQSNSTHCANIAEKSGNKERMNLRRAVMIEDWMEKQSSSQSSHFTTSSSSESTSGAGFSSSEAETTTHKSKPRHKSEKKQQQQQPQKPKREGDGGGGGGFSRTKLKALKIYGELNQKVKQPISPASRIASFLSSIFNAGNMKKAKMCYAGSTQDVDFNHKSKSPCFSSSASSFSRRSCMSKTPTSSSSSSAKGKRSVRFYPVSVILGEDSQNDPSLLPVSSVRKMTRVSSIKEVKKNSAKVKENVLMKGYQNSCKNNQFDFRGSYDHGEESDDDDDDDALSCSSSDLFELDHIVGAGRYQVELPVYETTNLERNKAIANGLCL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g2022 382 MobiDBLite consensus disorder prediction 125 145 - -
Lja6g2022 382 PANTHER PROTEIN BIG GRAIN 1-LIKE A 3 382 - -
Lja6g2022 382 MobiDBLite consensus disorder prediction 92 124 - -
Lja6g2022 382 MobiDBLite consensus disorder prediction 72 90 - -
Lja6g2022 382 MobiDBLite consensus disorder prediction 42 71 - -
Lja6g2022 382 MobiDBLite consensus disorder prediction 1 161 - -
Lja6g2022 382 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 3 382 IPR039621 GO:0009734
Lja6g2022 382 MobiDBLite consensus disorder prediction 218 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g2022 Lja-Chr6 48301855 48303273 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g2022 - - lja:Lj0g3v0252339.1 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2022 6 48301855 48303273 Lja3g1564 3 17171349 17173289 ECH
Lja6g2022 6 48301855 48303273 Lja1g4006 1 50783082 50784287 ECH
Lja6g2022 6 48301855 48303273 Lja6g2022 6 48301855 48303273 ECH