Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1564 ATGGAAAAGTGGGAGAAAACCTCAAGAGATCACAGGAAACAACACCACAGAGAAAAAAGCCCTTCTTTCTCTTCTACTCTTCTTGACGTTATCTACCGCTCCATCGACGAAGGACAAACAGAAGAGAAAGAAGAATCACTCATATTCTACAGAGAAACCATGAGGAAGCAGAAACAGAGCAACTGCTTCAGAGAAGAACAGAGTGTTCAAATTGAAGCTGAAAACCCCAGCTTTCGCAGAACCAGGAAGGTAGAGAATTGGACTGAGATAAGGAATTCACTGACTGAGTTGGAACGAAGAACACGAAGCAATTCCAATACACTCTCCATGTATTCAAGCTCTTCCTCCTCAGAGTCAAGTTCTGCTGGTGGATTCTCTTCATCAGAATCAGAGTCCTTCTATGGAGTGCAGAGGCCAAAGCCAATTCGGACCAGTGTTTCTGAAAAATTACCAAACCCTGATGATGGTCACAGAAGCTTTTCCGGTCGGTCAAAACCGTCCGCTCGCCCCAACACGGCTCAGGTCGGTCCAAACGGTCACACGGCCAGCCTGAATGACACTGGCCGAGAGACTGTTTGGACCGGCAGCATCGGGGCGAGCCGTCCGAAACAGCATGGTTTTGGGAAAACTAAGTCCAAAGCTTTGAGAATCTTGTACGGTGAATTGAAGAAAGCAAAGCAACCCGTTTCACCAGGTGCTAGGCTAGCTAGCTTTCTGAATTCTCTTTTCAATTCTGGTGGAGGAAATGCCAAAAAGGCAAAGGTTTCAACTACACCACCAACAACAACAACAAAGGTTTCAAACTCAGCACAACCTTCTTCTACTTGTTCATCAGCTTCATCTTTTTCAAGGTCTTGTTTGAGCAAAACCCCATCTTCAAGATCAGGTGCAAAAAGATCTGTGAGATTTTGCCCTGTGAGTGTGATAGTGGATGAAGATTGCAGACCATGTGGGCACAAGAATCTGCGTGAAGCTGATTATGGAAAGAGTAACGATGAGGAGCTAAGGTTGCATGTGATGAACGAGAGTCGAAGGGTGGAGGAGTTAGCAAGAGAATTGTTGAAGAATTATCAGAAAAAGAATGCAGGGGACTATGATCGCATGCAGTGTGAAGATGAAGATGATGATGATGCAGAAAGTTGTTCAAGTTCTGATCTATTTGAATTGGATAATCTATCAGCAATTGGGATTGAGAGGTATAGGGAAGAATTACCTGTGTATGAAACTACCCATTTCAAAACCAATCGAGCTATTGCCAATGGCTTTGTGATGTGA 1275 0.4431 MEKWEKTSRDHRKQHHREKSPSFSSTLLDVIYRSIDEGQTEEKEESLIFYRETMRKQKQSNCFREEQSVQIEAENPSFRRTRKVENWTEIRNSLTELERRTRSNSNTLSMYSSSSSSESSSAGGFSSSESESFYGVQRPKPIRTSVSEKLPNPDDGHRSFSGRSKPSARPNTAQVGPNGHTASLNDTGRETVWTGSIGASRPKQHGFGKTKSKALRILYGELKKAKQPVSPGARLASFLNSLFNSGGGNAKKAKVSTTPPTTTTKVSNSAQPSSTCSSASSFSRSCLSKTPSSRSGAKRSVRFCPVSVIVDEDCRPCGHKNLREADYGKSNDEELRLHVMNESRRVEELARELLKNYQKKNAGDYDRMQCEDEDDDDAESCSSSDLFELDNLSAIGIERYREELPVYETTHFKTNRAIANGFVM* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1564 424 MobiDBLite consensus disorder prediction 99 134 - -
Lja3g1564 424 MobiDBLite consensus disorder prediction 59 82 - -
Lja3g1564 424 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 11 424 IPR039621 GO:0009734
Lja3g1564 424 MobiDBLite consensus disorder prediction 98 210 - -
Lja3g1564 424 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g1564 424 MobiDBLite consensus disorder prediction 247 297 - -
Lja3g1564 424 MobiDBLite consensus disorder prediction 1 23 - -
Lja3g1564 424 MobiDBLite consensus disorder prediction 164 198 - -
Lja3g1564 424 PANTHER PROTEIN BIG GRAIN 1-LIKE A 11 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1564 Lja-Chr3 17171349 17173289 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1564 - - gmx:100801760 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g2022 6 48301855 48303273 Lja3g1564 3 17171349 17173289 ECH
Lja3g1564 3 17171349 17173289 Lja3g1564 3 17171349 17173289 ECH
Lja3g1564 3 17171349 17173289 Lja1g4006 1 50783082 50784287 ECH