Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g1175 ATGAAGATGGCATCAATCTCTGGAAAAGTGTTCACATTGGGGTTGATAAGCTTCTGGTATGCTTCCAACATTGGAGTTCTGCTATTGAACAAGTACCTGCTGAGCAACTATGGGTTCAGGTATCCAATTTTCCTCACCCTGTGCCACATGATGGCGTGCTCAATCCTCAGCTACGTTGCCATTTCATGGCTCAAAGTGGTGCCAATGCAGACGGTGCGGTCAAGGGTACAATTTGTGAAGATATCATCTTTGGGGCTCATTTTCTGCTTGTCTGTGGTAGGAGGGAACATCTCCCTCCGTTACCTCCCGGTGTCGTTCAACCAGGCTGTCGGCGCCACCACGCCTTTTTTCACGGCAGTGTTTGCTTATTTGATGACCCTTAAGAGGGAGGGTTGGCTCACATACATGAGTCTTGTCCCTGTTGTTGCTGGTGTTATGATTGCTAGTGGGGGAGAACCAAGTTTTCATCTATTTGGATTTTTAATGTGCATTGGTGCTACAGCAGCCAGGGCACTCAAAACAGTGCTTCAAGGGGTCTTGCTATCTTCTGAAGCGGAAAAGCTCAATTCTATGAACCTTCTCATGTACATGGCACCAGTGGCTGTTGCATTCCTTCTTCCAGCTTCAATTATTATGGAGGAAGATGTGGTTGGAATTACAATTGCACTTGCTAGAGACGATTCGAAGATTTTGTGGTTACTTCTCTTCAATTCTTCCCTGGCATATTTTGTCAACTTGACCAATTTTTTAGTTACAAACCACACCAGTGCATTAACACTTCAGGTCCTAGGAAATGCGAAAGGAGCTGTGGCAGTTGTTATATCCATTTTGATTTTTCGAAATCCTGTATCAGTTACTGGAATGTTTGGATATTCCCTCACAGTTATTGGAGTTATCCTGTATAGTGAAGCCAAGAAACGGAGTAAATGA 930 0.443 MKMASISGKVFTLGLISFWYASNIGVLLLNKYLLSNYGFRYPIFLTLCHMMACSILSYVAISWLKVVPMQTVRSRVQFVKISSLGLIFCLSVVGGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTLKREGWLTYMSLVPVVAGVMIASGGEPSFHLFGFLMCIGATAARALKTVLQGVLLSSEAEKLNSMNLLMYMAPVAVAFLLPASIIMEEDVVGITIALARDDSKILWLLLFNSSLAYFVNLTNFLVTNHTSALTLQVLGNAKGAVAVVISILIFRNPVSVTGMFGYSLTVIGVILYSEAKKRSK* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g1175 309 PANTHER - 2 308 - -
Lja6g1175 309 PANTHER SOLUTE CARRIER FAMILY 35 2 308 - -
Lja6g1175 309 Pfam Triose-phosphate Transporter family 14 302 IPR004853 -
Lja6g1175 309 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g1175 Lja-Chr6 34304551 34307396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g1175 1 309 Organic Solute Cotransporters AT3G11320 81.553 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g1175 - - gmx:100803533 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g1175 6 34304551 34307396 Lja6g1175 6 34304551 34307396 ECH
Lja6g1175 6 34304551 34307396 Lja6g0457 6 10965794 10973063 ECH
Lja3g3256 3 63444094 63446532 Lja6g1175 6 34304551 34307396 ECH