Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0457 ATGGCTCAAATTGCGCTTCTTGCTCCATCAACTGTCGTAGCTATTACTGGTAGGGGGAATAAGCAATTGAGGAAACTCTCTGCTGCAAGATACAGAGTGAAATCGCCGCCACCATCCTCGTCGCCACACTTTCTGAGTTGGAGGATTGAAAAGCTTCCTTGGTTTGATTCATCAAATTCATGTGGTGGTGGTGGTAGAAGTGCTGTGGTGAAGGTATCTGAAGGTGGAGCCATTTCCCTCCCTCATGATTGGTCACTGGAAAAGGGTTCAGGAGATCAAGCAACTGGGTCGTCAACGAGAATGAAGGGTTCGAGCCGTTTCTTCACGATTGGGCTTGTTGCAGCGTGGTACTCTTCCAACATTGGAGTGCTTCTGTTGAATAAGTACTTGCTCAGCAACTATGGTTTCAAGTACCCGATCTTTCTCACCATGTGTCACATGACTGCGTGCTCGTTGCTCAGCTATATTGCCATCGCGTGGATGAAGGTTGTGCCTATGCAGACCATTCGATCCAGGGTTCAATTCTTCAAGATCTCTGCGCTTAGTCTCATTTTCTGTGTCTCTGTGGTGTTTGGGAACATCTCGCTTCGGTATTTGCCTGTGTCTTTCAACCAGGCTATTGGTGCTACCACGCCTTTCTTCACTGCGGTTTTTGCTTACATCATGACATTCAAGAGGGAGGCTTGGCTCACTTACCTGACCCTTGTTCCTGTTGTTACTGGGGTTGTCATTGCAAGTGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATAATATGTATTGCGGCTACAGCGGCAAGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTTCTTCTTCCTGCCACACTTATAATGGAAGAAAATGTTGTTGGCATCACCTTGGCGCTCGCCAGAGATGATGTCAAGATCATTTGGTATCTTCTATTTAATTCGACACTTGCGTATTTTGTCAACCTGACCAATTTTCTGGTCACGAAACATACCAGTGCTTTGACCCTTCAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTAATATTTAAAAACCCAGTGTCAGTCACTGGAATGATGGGTTATGCGCTCACAGTCTTTGGAGTAATACTTTACAGTGAAGCCAAAAAGCGAAGCAAGTGA 1221 0.4537 MAQIALLAPSTVVAITGRGNKQLRKLSAARYRVKSPPPSSSPHFLSWRIEKLPWFDSSNSCGGGGRSAVVKVSEGGAISLPHDWSLEKGSGDQATGSSTRMKGSSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYIAIAWMKVVPMQTIRSRVQFFKISALSLIFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYIMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFIICIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSTLAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMMGYALTVFGVILYSEAKKRSK* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0457 406 Pfam Triose-phosphate Transporter family 112 399 IPR004853 -
Lja6g0457 406 PANTHER - 21 405 - -
Lja6g0457 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 297 400 - -
Lja6g0457 406 PANTHER SOLUTE CARRIER FAMILY 35 21 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0457 Lja-Chr6 10965794 10973063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja6g0457 100 406 Organic Solute Cotransporters AT3G11320 90.554 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0457 - - vra:106757848 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0457 6 10965794 10973063 Lja6g0457 6 10965794 10973063 ECH
Lja3g3256 3 63444094 63446532 Lja6g0457 6 10965794 10973063 ECH
Lja6g1175 6 34304551 34307396 Lja6g0457 6 10965794 10973063 ECH
Lja6g0457 6 10965794 10973063 Lja6g0457 6 10965794 10973063 PCT