Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3256 ATGGTGATCATGAACCAGATTCCATGGCAAACCATTGCAGTGGTAATCTCCTGGTACAGCTCCAACATCGGAGTCCTTCTCATGAACAAGTTCTTGCTCAGCAACTACGGTTTCAAGTACCCTGTTTTCCTCACCACATGTCACATGATGGTGTGCTCTGTTTTCAGCTACGTTGGAATCTCAGTCATGGACATAGTCCCTTTGCAGAATATTCAGTCCAAGGAACAGTTCGCCAAAATCTGTGCCCTCAGTGTCGTTTTCTGTTTCTCCGTCGTTTGTGGGAACATGTCGTTGAAGTATATACCTGTGTCGTTTAACCAGGCTATTGGTGCCACCACACCATTCTTCACTGCCGTTTTTGCTTATGCCGTTAGCAGAAAGAGGGAAGCTTGGGTTACTTATGGTACCCTTTTGCCTGTTGTTGCTGGTGTTGTCATAGCTAGTGGGGGAGAACCAAGTTTTCAACTGTTTGGATTCTTAATCTGTGTTTCATCCACTGCTGCAAGAGCATTTAAATCAGTGCTTCAAGATATCTTGCTCTCCTCAGAGGGGGAGAAGTTGAATTCTATGAACCTGCTGCTTTACATGACACCTATAGCAATGTTGGTCTTACTTCCAGCAACATTGTTGATGGAAGAAAACGTGATTTGGATCACAATAGAGCTTGCAAGAAAGGATATTAGAATTCTCTGGTATCTGCTGTTCAGTTCTTCTCTTGCATACTTTGTGAACCTCACTAATTTTTTGGTGACCAAATATACAAGTGCGCTTACCCTTCAGGTGTTAGGAAATGCAAAGGGGGCAATTGCTGTGGTGGTGTCAATTCTGATATTCAAGAATCCAATTTCCATGATAGGAATGCTTGGCTATGGGCTCACTGTCATTGGCGTTGTACTGTACAGTGAAAGCAAGAAGAGGTATAGTAGAAACTAG 933 0.433 MVIMNQIPWQTIAVVISWYSSNIGVLLMNKFLLSNYGFKYPVFLTTCHMMVCSVFSYVGISVMDIVPLQNIQSKEQFAKICALSVVFCFSVVCGNMSLKYIPVSFNQAIGATTPFFTAVFAYAVSRKREAWVTYGTLLPVVAGVVIASGGEPSFQLFGFLICVSSTAARAFKSVLQDILLSSEGEKLNSMNLLLYMTPIAMLVLLPATLLMEENVIWITIELARKDIRILWYLLFSSSLAYFVNLTNFLVTKYTSALTLQVLGNAKGAIAVVVSILIFKNPISMIGMLGYGLTVIGVVLYSESKKRYSRN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3256 310 Pfam Triose-phosphate Transporter family 12 301 IPR004853 -
Lja3g3256 310 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 303 - -
Lja3g3256 310 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 5 309 - -
Lja3g3256 310 PANTHER SOLUTE CARRIER FAMILY 35 5 309 - -
Lja3g3256 310 SUPERFAMILY Multidrug resistance efflux transporter EmrE 73 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3256 Lja-Chr3 63444094 63446532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3256 11 306 Organic Solute Cotransporters AT5G05820 76.014 3.07e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3256 - - gmx:100799632 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3256 3 63444094 63446532 Lja6g0457 6 10965794 10973063 ECH
Lja3g3256 3 63444094 63446532 Lja3g3256 3 63444094 63446532 ECH
Lja3g3256 3 63444094 63446532 Lja6g1175 6 34304551 34307396 ECH