Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja6g0351 ATGCCTTCTTCTCTTCAGCTGGAGATGTTTAATCCAACCACCGACGCTGCCGCCTCGGCCTCCGCCGCCCTCGCCAACGGCTTCAACTACCCGAAGACTCCTCAAACGCGGCCACCCATGGCGGCGCGTGGAGTCTTGCTAACGCTCCCAGCGTCCCTGTACTCCGGCGAAGGAAACGGCTTCCTTACAGAGGACGGCGTGGTCGCCTACCACGCGCACACGGTGGGCCCCAACCAGTGCTGCTCAGTGGTTACCCAGTCAATCGACGCACCAGTCTCCACCGTGTGGGCGGTGGTCCGGCGCTTCGACAACCCGCAAGGTTACAAGACATTCGTGAAGAGCTGCCACGTGGTTGCCGGCGACGGCACTCACGTCGGGGCAGTCCGCGAGGTCCGCGTGGTGTCCGGGCTCCCTGCTGAGTCGAGCACGGAGAGGCTGGAGATCCTCGACGACGAGCGCCACATCATGAGCTTCAGCGTCGTTGGCGGGGAGCACCGCCTCTGTAACTACCGGTCAGTGACGACGCTCCACCACAACGGCGTGGACGCGACGCTGGTGGTGGAGTCGTACGTTGTTGACGTGCCGCAAGGTAACACGAAGGAAGAGACATGCGGGTTCGTCGACACGATCGTGCGTTGTAATCTGCAGTCGCTGGCTCAGATCGCAGAGAATTTGAGCAAAAACTCAATGTGA 693 0.6176 MPSSLQLEMFNPTTDAAASASAALANGFNYPKTPQTRPPMAARGVLLTLPASLYSGEGNGFLTEDGVVAYHAHTVGPNQCCSVVTQSIDAPVSTVWAVVRRFDNPQGYKTFVKSCHVVAGDGTHVGAVREVRVVSGLPAESSTERLEILDDERHIMSFSVVGGEHRLCNYRSVTTLHHNGVDATLVVESYVVDVPQGNTKEETCGFVDTIVRCNLQSLAQIAENLSKNSM* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja6g0351 230 Gene3D - 58 230 IPR023393 -
Lja6g0351 230 CDD PYR_PYL_RCAR_like 80 223 - -
Lja6g0351 230 SUPERFAMILY Bet v1-like 79 221 - -
Lja6g0351 230 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 42 229 - -
Lja6g0351 230 Pfam Polyketide cyclase / dehydrase and lipid transport 80 223 IPR019587 -
Lja6g0351 230 PANTHER - 42 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja6g0351 Lja-Chr6 8989825 8990988 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja6g0351 K14496 - gmx:121174020 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja6g0351 6 8989825 8990988 Lja6g0351 6 8989825 8990988 ECH
Lja1g3343 1 41586906 41588630 Lja6g0351 6 8989825 8990988 ECH
Lja3g3367 3 66403593 66404743 Lja6g0351 6 8989825 8990988 ECH
Lja6g0351 6 8989825 8990988 Lja6g0351 6 8989825 8990988 PCT