Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3367 ATGCCCCCAAACCCACCCAAGTCATCTCTCCTCCTCCACCGGATCAACCACACCACCACAGTTAACTGCCACGACCTCCATCGTGACACCATCCTCGTGAGGACCCCCGCCGCCGTCCCCGACACAGTGGCGCGCTACCACACCCACGCCGTCTCCCCGAACCAGTGCTGCTCCGCAGTGGTTCAAGAAACCACCGCCTCCATCGCCACCGTCTGGTCCGTCGTGCGGCGCTTCGACAACCCGCAAGCCTACAAACACTTCGTCAAGAGCTGTCATGTCATCGGCGGCGACGGCAACGTCGGCACACTCCGGGAAGTCCACGTCATCTCCGGCCTCCCCGCTGGCCGGAGCACCGAGCGGCTTGAGATCCTCGACGAGGAGCGCCATGTCCTCAGCTTCAGCGTCGTCGGCGGAGACCACCGGCTCGCGAACTACCGGTCCGTCACTACGCTCCACCCCTCCGCCGCCGGAGACGGCACCGGGACGGTGGTTGTGGAGTCGTACGTGGTGGATGTTCCGCCGGGAAACACGAAAGAGGACACGCGCGTGTTCGTGGACACGATTGTCGGGTGCAACCTTCAGTCACTCGCGCAAACCGCTGAGAGCTTGACACAACCAAACAATAACAAGTGA 633 0.6319 MPPNPPKSSLLLHRINHTTTVNCHDLHRDTILVRTPAAVPDTVARYHTHAVSPNQCCSAVVQETTASIATVWSVVRRFDNPQAYKHFVKSCHVIGGDGNVGTLREVHVISGLPAGRSTERLEILDEERHVLSFSVVGGDHRLANYRSVTTLHPSAAGDGTGTVVVESYVVDVPPGNTKEDTRVFVDTIVGCNLQSLAQTAESLTQPNNNK* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3367 210 SUPERFAMILY Bet v1-like 56 199 - -
Lja3g3367 210 Pfam Polyketide cyclase / dehydrase and lipid transport 60 201 IPR019587 -
Lja3g3367 210 PANTHER ABSCISIC ACID RECEPTOR PYL4-LIKE 27 207 - -
Lja3g3367 210 CDD PYR_PYL_RCAR_like 56 201 - -
Lja3g3367 210 Gene3D - 16 210 IPR023393 -
Lja3g3367 210 PANTHER - 27 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3367 Lja-Chr3 66403593 66404743 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3367 K14496 - gmx:100788199 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3367 3 66403593 66404743 Lja6g0351 6 8989825 8990988 ECH
Lja3g3367 3 66403593 66404743 Lja3g3367 3 66403593 66404743 ECH