Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2842 ATGTATCCTGGGTGTTGCTTGTTAGCGCCGCCGTTGGGTAGATGCTCTGGGAAGAAAGCTTGTGGCTCGTTTTTACTGTTTTGTGGTGCCTGTTTAAGTGCTCTTGTGCTTTCTGCCATGGAAAAGTTCAAGCTCAAATGCAAAGGGATTTTCTCCAGCATAGGTTGTCTTGGAAGCTGCACAAAACCTCCAGTTATTGGTTCAATGGATGAGGCATCTAAAGGACTAAGAAATCAAGGTCAAACAGTGACTAAAGATGATGGATCATCAGATTTCTGGAGCAGCAACACTATCGAAATGGATCATAATGCAGCTCAGTCGCTGAGAAGCGTCTCATCAACTGCAACATCAAATTATCCTTCTGATCCCCAAAGTAGTGCATGCAGTCAAACTGCTCCTCCTGAATTTGTCAACCATGGGCTTCTTCACTGGTACCAGATGAGGCAACAATGGGTTGGAAATAAAACCTCTGAGAGTCAGACAGAAGTTCGAGAACCAAAAATAAGTTTGAATGCCACCTACGACAATCTACTTGGAAACAACAAGCCCTTTCCCCAACCCATCCCTTTGAGAGAAATGGTATACTTTCTTGTTGATATTTGGGAGCAAGAGGGTCTATATGACTGA 627 0.437 MYPGCCLLAPPLGRCSGKKACGSFLLFCGACLSALVLSAMEKFKLKCKGIFSSIGCLGSCTKPPVIGSMDEASKGLRNQGQTVTKDDGSSDFWSSNTIEMDHNAAQSLRSVSSTATSNYPSDPQSSACSQTAPPEFVNHGLLHWYQMRQQWVGNKTSESQTEVREPKISLNATYDNLLGNNKPFPQPIPLREMVYFLVDIWEQEGLYD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2842 208 MobiDBLite consensus disorder prediction 111 130 - -
Lja5g2842 208 PANTHER OS07G0479600 PROTEIN 14 208 - -
Lja5g2842 208 PANTHER DUF4050 FAMILY PROTEIN 14 208 - -
Lja5g2842 208 Pfam Protein of unknown function (DUF4050) 99 165 IPR025124 -
Lja5g2842 208 Pfam Protein of unknown function (DUF4050) 167 208 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2842 Lja-Chr5 55941936 55945946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2842 - - gmx:100818696 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2842 5 55941936 55945946 Lja5g2842 5 55941936 55945946 ECH
Lja1g3878 1 48910034 48913507 Lja5g2842 5 55941936 55945946 ECH
Lja4g1929 4 19599316 19603190 Lja5g2842 5 55941936 55945946 ECH