Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g3878 | ATGGCTCTCTCAGATTCTCGCCTGTATGGGAGCAGAGGTTGTCTTGGATGCTTTCCAAAACCTATCTCAATGGATGAGGCATCTAAGGGGCTAATAACTCAAGGCTCAGCAATTAATAACTATGACAGATCAGAAGATATTTGGAGCAGCAGCTCATTCTATATGGATCACAGTGCAGGTTATTCCCAGAGAAGCTTCTCATCAATTACCATACCAAACCATCCTTCTGATCCTCAAAGCAGTGCTGGCAATCAGATTGATCATCCTGAAGAATTTGTCAATCATGGTCTTCGTCTCTGGAAGCAGACAAGGAAACAATGGGTTGGAAATAAAAAGACCGAGCGACGGATGCAAGTTGGAGAATCCAGAATAAGTTGGAATGCTACCTACGAGAGTCTACTCGGAACCACCAGGCCATTTCGCCAGCCCATTCCTCTTGGAGAAATGGTTGAGTTTCTTGTTGACATTTGGGAGCTAGAGGGGCTTGTATGA | 492 | 0.4472 | MALSDSRLYGSRGCLGCFPKPISMDEASKGLITQGSAINNYDRSEDIWSSSSFYMDHSAGYSQRSFSSITIPNHPSDPQSSAGNQIDHPEEFVNHGLRLWKQTRKQWVGNKKTERRMQVGESRISWNATYESLLGTTRPFRQPIPLGEMVEFLVDIWELEGLV* | 164 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g3878 | 163 | Pfam | Protein of unknown function (DUF4050) | 52 | 118 | IPR025124 | - | |
| Lja1g3878 | 163 | Pfam | Protein of unknown function (DUF4050) | 123 | 161 | IPR025124 | - | |
| Lja1g3878 | 163 | PANTHER | DUF4050 FAMILY PROTEIN | 8 | 162 | - | - | |
| Lja1g3878 | 163 | PANTHER | OS07G0479600 PROTEIN | 8 | 162 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g3878 | Lja-Chr1 | 48910034 | 48913507 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g3878 | - | - | lja:Lj1g3v1911640.1 | 308.531 |
Event-related genes