Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2493 ATGCAAATTCAACAAATACACAGTAGTGTCTCCGCTCCACAGTACTCTGTATCTGATCCATTTATTAGAGATCTCTCTTTGCTTTTTCCGCTGCACAAATTGTTCAAATTTCTGAGTCTCGCTATGGCCACCGGAGTCAACAGAAAAATTTATGCAGCGTCAGCCCGTTCTCACACCAGGAGGACAAAGAAAACCAGCTCGTTTCAGCTCCCTTCAGGAATTCTTAGAACAACACTAGCAGTGTTGTTTATTGGGTTTGTAGCATGGGCTTATCAGGCTAATCGACCTCCTCCTCCCAAGATATGTGGCTCTCCTGATGGACCGCCTGTAACGACAGCAAGAATCAAACTAAGAGATGGGAGGTATTTGGCATACAGAGAGCATGGTGTTCCTAAAGACGCAGCCAAGTATAAAATCATCTTCGTCCATGGTTTTGGTAGTAGCAGTCATACTTCTCCAGTTGCAGAAAGCCTATCACCTGCTGTTGTTGAGGACTTGGGGATCTATATTGTATCTTTTGACAGACCTGGTTACGGGGAAAGTGATCCTGATCCAAGTCGAACACTAAAGAGTATTGCATTTGATATAGAAGAGCTTGCTGATAAGCTGGGACTAGGGTCCAAATTTTATGTAACTGGTCTCTCCATGGGTGGACAGATTGTTTGGAACTGCCTTAAGTACATACCTCATAGGCTGGCAGGTGCAGCTCTCTTGACCCCAGTTGTGAACTACTGGTGGCGTGGTCTTCCGGAAAACTTAACTACTGAAGCCTATTACCAACAAAAACTACGAGACCAATGGGCACTTCGTGTGGCTCACTACACACCATGGCTAACTTACTGGTGGAACACTCAAAAATGGTTCCCAGTCGCTAGTGCAATTGGTGATGTTCAAGGTGTCCTTTCAAATCAAGACAAACTGCTTGTATCTAAAGTAACTAAGAGAAAGAGTCATGTGGTGCATGCAAGACAGCAAGGTGAATTCGAAAGCCTCCACCGGGACATAAATATTGGATTTGGAAGCTGGGAATATAGTCCTTTGGATCTTGAAAACCCTTTTCCAACTAATGAAGGTTCTGTCCATCTTTGGCAAGGAGATGAGGACTTGTTGGTTCCTGTTACAGTGCAACGGCACATTGCGCAAAACCTACCATGGATTCAATATCACGAACTTCCAGGTTCCGGTCACTTGTTCTGTCTTGGAGATGGTATTAGTGATACTATTATTAAGTCCCTTTTAGGTGTGAAGTAA 1251 0.4404 MQIQQIHSSVSAPQYSVSDPFIRDLSLLFPLHKLFKFLSLAMATGVNRKIYAASARSHTRRTKKTSSFQLPSGILRTTLAVLFIGFVAWAYQANRPPPPKICGSPDGPPVTTARIKLRDGRYLAYREHGVPKDAAKYKIIFVHGFGSSSHTSPVAESLSPAVVEDLGIYIVSFDRPGYGESDPDPSRTLKSIAFDIEELADKLGLGSKFYVTGLSMGGQIVWNCLKYIPHRLAGAALLTPVVNYWWRGLPENLTTEAYYQQKLRDQWALRVAHYTPWLTYWWNTQKWFPVASAIGDVQGVLSNQDKLLVSKVTKRKSHVVHARQQGEFESLHRDINIGFGSWEYSPLDLENPFPTNEGSVHLWQGDEDLLVPVTVQRHIAQNLPWIQYHELPGSGHLFCLGDGISDTIIKSLLGVK* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2493 416 Pfam alpha/beta hydrolase fold 139 400 IPR000073 -
Lja5g2493 416 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 42 413 - -
Lja5g2493 416 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 42 413 - -
Lja5g2493 416 SUPERFAMILY alpha/beta-Hydrolases 104 400 IPR029058 -
Lja5g2493 416 Gene3D alpha/beta hydrolase 103 410 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2493 Lja-Chr5 48918948 48922952 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2493 - - lja:Lj5g3v0769540.1 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2493 5 48918948 48922952 Lja5g2493 5 48918948 48922952 ECH
Lja5g2493 5 48918948 48922952 Lja3g0977 3 10047072 10050087 ECH
Lja5g2493 5 48918948 48922952 Lja3g3595 3 71216634 71219489 ECH