Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0977 ATGGTTTCAAGAGCAGCAATAGTGTTACTCATGGGTCTTCTGGGAATGGTTTATCAGGGAACTCAACTTCCCCCTAATGATTCTGCTATTACTCCTGTGGTTTCACCAAGAATCAGACTCAGAGATGGAAGGTACATGGCTTACAGAGAAAGGGGCGTCCCCAAGGAGAAAGCAAAACACAGCATCATCATTGTTCATGGATTTGGAAGCTCCAAGGATATGAACTTTCAGGCACCCCAAGAACTGATAGATAAGTTGAATATACATATTGTGCAATATGATCGAGCTGGTTATGGAGAAAGTGATCCATACCCCAAACGCTCATTGGAAAGTGAAGCACTTGATATTGAAGAGCTTGCAGATCAATTGCAGATAGGATCAAAATTTTATGTGATTGGAGTCTCAATGGGGTCATATGCTGCCTGGAGTTGTCTGCACTACATCCCAAACAGGCTAGCAGGGGTGGCTATGATAGCCCCAATCATCAACTATAAGTGGCCTTCTCTTCCTGAGAGTCTGGTAAAGGATGACTATAGGAGGAAATTGGTCAAATTTTCTCTGTGGCTTGCAATCTATACACCTAAACTTTTGCACTGGTGGGTGTCTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAATCCTGCATTCTTCAACGGAAGAGATATAGATATTTTAAAAAGAATTCCAGGGTTCCCAATGCTTACTAAGGACAAGTTGAGGGACCAGGTAGTTTTTGACACTCTCAGGGGTGACTGGCTGGTGGCATTTGGAAACTGGGAATTTGATCCAATGAAGCTAAGTAGTCCATTCCCTCATAATAAAAGTTCAGTTCATATTTGGCAGGGCTATGAAGATAAGGTGGTGCCCTCTAAAATCCAGAGATATGTTTCAGAGAAACTTCCTTGGATACAATATCATGAAGTTCCTGATGGTGGCCATTTAGTTGTACACTATAGTGGTATATTTGAGGCTATTTTGAAGGCCCTTTTACTCGGGGAAGAAAATCTTTCATATAAACCTAGACCAGCAATATCTGTATCTTGA 1050 0.4152 MVSRAAIVLLMGLLGMVYQGTQLPPNDSAITPVVSPRIRLRDGRYMAYRERGVPKEKAKHSIIIVHGFGSSKDMNFQAPQELIDKLNIHIVQYDRAGYGESDPYPKRSLESEALDIEELADQLQIGSKFYVIGVSMGSYAAWSCLHYIPNRLAGVAMIAPIINYKWPSLPESLVKDDYRRKLVKFSLWLAIYTPKLLHWWVSQKWLPSNSVIEKNPAFFNGRDIDILKRIPGFPMLTKDKLRDQVVFDTLRGDWLVAFGNWEFDPMKLSSPFPHNKSSVHIWQGYEDKVVPSKIQRYVSEKLPWIQYHEVPDGGHLVVHYSGIFEAILKALLLGEENLSYKPRPAISVS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0977 349 Pfam Alpha/beta hydrolase family 62 319 IPR000073 -
Lja3g0977 349 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 342 - -
Lja3g0977 349 SUPERFAMILY alpha/beta-Hydrolases 30 318 IPR029058 -
Lja3g0977 349 Gene3D alpha/beta hydrolase 27 332 IPR029058 -
Lja3g0977 349 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0977 Lja-Chr3 10047072 10050087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0977 56 318 Acyl Lipid Metabolism Gene Families AT1G64670 22.261 2.44e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0977 - - gmx:100803294 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0977 3 10047072 10050087 Lja3g0977 3 10047072 10050087 ECH
Lja3g0977 3 10047072 10050087 Lja3g3595 3 71216634 71219489 ECH
Lja5g2493 5 48918948 48922952 Lja3g0977 3 10047072 10050087 ECH
Lja3g3595 3 71216634 71219489 Lja3g0977 3 10047072 10050087 PCT