Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3595 ATGTTTAATCCAATAGCAGTGGCGGTGGCGGTGGCGGCGGTGGTGATTCTCATAGGGTGGGTACATAGGGCCATAAAGCCTCCTCCTCCAACAGCATGTGGATCTGTTGGTGGTCCTCCAGTCACTTCACCAAGAGTGAAACTCAGTGATGGAAGGCATTTGGCCTATAGGGAATTTGGTGTTCCAAAGGAAGAAGCTAGGTACAAGATGATTATCATTCATGGATATGGCGATTCCAAAGATTCAAAATTGATTAATGTTTCTCAAGAACTTGTTGAAGATCTAGGGATATATTTCCTCTCCTTTGACAGAGCAGGTTACGGCGAGAGTGATCCAAATCCATTGCGTTCAGTGAAGAGTGAAGCATATGATATTCAAGAACTAGCTGATAAAGTGCAAATTGGGGATAAATTTTATGTCCTTGGAATGTCAATGGGAGGCTACTCTGCTTGGAGCTGCCTAAACTACATTTCACATAGATTATTAGGAGTAGCATTGGTAGCTCCAGTGCTAAATTACTTTGGGATGCCCTCTTTTCCTGATAATTTATTAAAAGAGGCTCTTCGGATGCTACCTAAGTCAGACCGGTGGACACTTCGAGTTGCTCATTACGCCCCTTGGTTGTTCTATTGGTGGAGGACTCAAAAATGGTTCCCAACATTGTCGCCGGTAAATCTTGAAACGTTGCCTCATGAGGATATAGAGGCCATAAAGAGCTTGCCAGAAGATCCAAACATGGGCCAGAAAGCAACTCAGCAAGGTACATATGAATCATTACACCGAGACTTAATAGTTGCTTTGGGAAAGTGGGAGTTTGGCCCAACAGAGATAAAAAATCCATTCCCTGACAATGATGGTGCTGTTCACCTTTGGCAAGGCTCCAAGGATACGATAATTTCATGTATGCTGATGCGTTACATCGCACACAAACAACCTTGGATTCATTATCATGAGCTTCCTAATGCGGGGCATATGTTCATCAAATCGAGAAATGAATGTGAATCTATAATTAGAGCACTTCTAGCCTCATAA 1032 0.4302 MFNPIAVAVAVAAVVILIGWVHRAIKPPPPTACGSVGGPPVTSPRVKLSDGRHLAYREFGVPKEEARYKMIIIHGYGDSKDSKLINVSQELVEDLGIYFLSFDRAGYGESDPNPLRSVKSEAYDIQELADKVQIGDKFYVLGMSMGGYSAWSCLNYISHRLLGVALVAPVLNYFGMPSFPDNLLKEALRMLPKSDRWTLRVAHYAPWLFYWWRTQKWFPTLSPVNLETLPHEDIEAIKSLPEDPNMGQKATQQGTYESLHRDLIVALGKWEFGPTEIKNPFPDNDGAVHLWQGSKDTIISCMLMRYIAHKQPWIHYHELPNAGHMFIKSRNECESIIRALLAS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3595 343 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 8 342 - -
Lja3g3595 343 Gene3D alpha/beta hydrolase 39 343 IPR029058 -
Lja3g3595 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 342 - -
Lja3g3595 343 Pfam Serine aminopeptidase, S33 65 260 IPR022742 -
Lja3g3595 343 SUPERFAMILY alpha/beta-Hydrolases 38 330 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3595 Lja-Chr3 71216634 71219489 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3595 - - gmx:100808779 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3595 3 71216634 71219489 Lja3g3595 3 71216634 71219489 ECH
Lja3g0977 3 10047072 10050087 Lja3g3595 3 71216634 71219489 ECH
Lja5g2493 5 48918948 48922952 Lja3g3595 3 71216634 71219489 ECH
Lja3g3595 3 71216634 71219489 Lja3g0977 3 10047072 10050087 PCT