Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1602 ATGGATTTGGTTTCTGAATCAACAACGTCAACGCCGATCACGCCACCAACCATGAGCATTTCAGCTTCCGCCACCGGAAGCAGCGGTACTGTAACCACCCCCACCGCGGCCACGACTCCGAGCCGTTACGAGAACCAGAAGCGGCGAGACTGGAACACGTTCTGCCAGTACCTTCGAAACCACCGTCCGCCGCTGTCGCTGTCTCTCTGCAGCGGCGCGCACGTGCTGGAGTTTCTCCACTATCTCGACCAGTTCGGGAAGACGAAGGTTCACAACCATCCTTGCCCGTTCTTCGGGCTTCCGAACCCGCCTGCTCCCTGCCCCTGCCCGCTCCGGCAGGCATGGGGAAGTCTCGACGCGCTCATCGGACGTCTACGCGCCGCCTATGAGGAGAACGGAGGTAGGCCGGAGACGAACCCGTTCGGTGCTCGCGCGGTGAGGATTTACCTCCGGGATGTTCGTGACTTCCAGACGAAGGCGAGAGGTGTTAGCTATGAGAAGAAGAGGAAGAGGCCTAAGCCCAAGATGATAACAACCACCGCTGCAACTGCTTCTACTTAG 561 0.5936 MDLVSESTTSTPITPPTMSISASATGSSGTVTTPTAATTPSRYENQKRRDWNTFCQYLRNHRPPLSLSLCSGAHVLEFLHYLDQFGKTKVHNHPCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPETNPFGARAVRIYLRDVRDFQTKARGVSYEKKRKRPKPKMITTTAATAST* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1602 186 MobiDBLite consensus disorder prediction 161 186 - -
Lja5g1602 186 Coils Coil 181 186 - -
Lja5g1602 186 ProSiteProfiles ALOG domain profile. 42 169 IPR006936 -
Lja5g1602 186 MobiDBLite consensus disorder prediction 1 42 - -
Lja5g1602 186 PANTHER PROTEIN G1-LIKE5 17 178 - -
Lja5g1602 186 Pfam ALOG domain 37 155 IPR006936 -
Lja5g1602 186 MobiDBLite consensus disorder prediction 1 44 - -
Lja5g1602 186 PANTHER PROTEIN G1-LIKE2 17 178 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1602 Lja-Chr5 17268418 17270300 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1602 - - gmx:100791424 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1025 1 10181627 10182856 Lja5g1602 5 17268418 17270300 ECH
Lja5g1847 5 21843694 21845901 Lja5g1602 5 17268418 17270300 ECH
Lja6g0050 6 939548 942564 Lja5g1602 5 17268418 17270300 ECH
Lja5g1602 5 17268418 17270300 Lja5g1602 5 17268418 17270300 ECH