Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1025 ATGGATTCAATTCAAGAATTTATAGGCACATGCAACTCTGACAGCACCTGCAGTCTCACCAATAACACCAGCATGACCACCCTCACCAGCTTGGCTTCCGGCTCCGGTGCCAGCTCTTCACCATCTGCTTCCAACAGCACCGCCGCCACCAGCAGCCGCTATGAGAACCAGAAGCGCCGTGACTGGAACACCTTTGGTCAGTACCTCAAAAATCACCGACCCCCTCTTTCCCTCTCCAGGTGCAGCGGTGCACATGTCCTTGAATTTCTGAGGTACCTGGATCAATTTGGAAAAACCAAAGTGCACTCAGCGATGTGCCCCTTCTATGGGCACCCAAACCCTCCAGCTCCATGTCCATGTCCTCTGAGGCAAGCTTGGGGGAGCCTGGACGCCCTCATCGGTCGCCTCAGAGCAGCATTTGAGGAAAACGGAGGCAAACCAGAAGCCAACCCTTTCGGAGCTCGAGCCGTTAGGCTCTACCTCCGTGAGGTCCGTGATGTTCAGTCCAAAGCAAGAGGGATCAGTTATGAGAAGAAGAAACGGAAGCGCCCTCCACCACAACAATCCATGATGCCACCTCCAGCAGGTGCCACTCATTAG 600 0.545 MDSIQEFIGTCNSDSTCSLTNNTSMTTLTSLASGSGASSSPSASNSTAATSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHSAMCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQSKARGISYEKKKRKRPPPQQSMMPPPAGATH* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1025 199 PANTHER G1-LIKE PROTEIN 1 189 - -
Lja1g1025 199 MobiDBLite consensus disorder prediction 31 56 - -
Lja1g1025 199 MobiDBLite consensus disorder prediction 171 199 - -
Lja1g1025 199 ProSiteProfiles ALOG domain profile. 53 180 IPR006936 -
Lja1g1025 199 MobiDBLite consensus disorder prediction 31 53 - -
Lja1g1025 199 Pfam ALOG domain 44 166 IPR006936 -
Lja1g1025 199 PANTHER PROTEIN G1-LIKE2 1 189 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1025 Lja-Chr1 10181627 10182856 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1025 - - ccaj:109797167 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1025 1 10181627 10182856 Lja5g1602 5 17268418 17270300 ECH
Lja1g1025 1 10181627 10182856 Lja1g1025 1 10181627 10182856 ECH
Lja1g1025 1 10181627 10182856 Lja5g1847 5 21843694 21845901 ECH
Lja6g0050 6 939548 942564 Lja1g1025 1 10181627 10182856 ECH
Lja1g1025 1 10181627 10182856 Lja6g0050 6 939548 942564 PCT
Lja5g1847 5 21843694 21845901 Lja1g1025 1 10181627 10182856 PCT