Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3328 ATGTTTACAGACATTCTCGTTATAAAGCCTCAGAAGAAATCGCCACTCTTGTTAAAGATGTCAGTGTTGATATTTTCAATGGTGTATGGTGTTTTTATCTGTTCAGCTTGTCTAAAGCAGTCAAGCATTCATGCTAGGAGTGTTCTTCCGAAGCTGCAAGTTATTGAAAAGCCTTCTTCAAGTTACCTGCATTACCCCAAACCCGTTTCTTTTAACAGGAGTGAGTGTTCTCGTAATCCTGTGAAATTCTTTGCCATAGTGTCGAATCCAAGATCTGGCAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATGTTAATGTGAGCTCAAATGGAGAGGTAATGGCTCCGAAAAGACGAGTAAATGTTTCTACAATCGTAAAGACTTTAGATAAAGTTTACAATTTGGACTGGCTCAGTAGTGCTTCCAAGAATGAGTGCTCTGCTGCAATTGGCTTAAAGTGGATGCTTAATCAGGGATTATTGAAGCACCATGAAGAAATAGCATACTACTTCAACCGCAGAAGTGTCTCTATCATATTTCTTTTCCGGAGAAACTTATTACGTAGAATGATATCAAAGCTTGCCAATTCCTATGATCGTCATGCGAAGTTGTCGAATGGAACTCATAATTCTCACGTTCATTCTGCAGAAGAGGCTGATACGCTTTCAAAGTACAAGCCTACAATAAAATCGACATCATTGTTGACAACCTTGAAGGATATGGAGATGAGAGATGCTAAGGCTTTAGAATACTTCAACACCACTCGGCATATAATCTTGTATTATGAGGATCTTATGAGGAATCCTAATAAGCTAAAAGACGTGCAGGATTTTCTAGGATTGCCACAGATGGAATTAACAAGCAGTCAGGTTAAGATACATAGAGGACCATTGTCAGGCCTTGTGAGAAACTGGGATGACATTACCAAGACACTCAAAGGAACTGCTTATGAGAGTTTTCTCCAAGCTGACTATTCATCTTACCGCTTCCAACTCTCTGCAAAGGTATAA 1011 0.3966 MFTDILVIKPQKKSPLLLKMSVLIFSMVYGVFICSACLKQSSIHARSVLPKLQVIEKPSSSYLHYPKPVSFNRSECSRNPVKFFAIVSNPRSGSGWFETLLNSHVNVSSNGEVMAPKRRVNVSTIVKTLDKVYNLDWLSSASKNECSAAIGLKWMLNQGLLKHHEEIAYYFNRRSVSIIFLFRRNLLRRMISKLANSYDRHAKLSNGTHNSHVHSAEEADTLSKYKPTIKSTSLLTTLKDMEMRDAKALEYFNTTRHIILYYEDLMRNPNKLKDVQDFLGLPQMELTSSQVKIHRGPLSGLVRNWDDITKTLKGTAYESFLQADYSSYRFQLSAKV* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3328 336 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 3 325 - -
Lja4g3328 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 324 IPR027417 -
Lja4g3328 336 Pfam Sulfotransferase domain 86 285 IPR000863 GO:0008146
Lja4g3328 336 Gene3D - 80 309 IPR027417 -
Lja4g3328 336 PANTHER SULFOTRANSFERASE 3 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3328 Lja-Chr4 62981671 62985420 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3328 - - gmx:100778075 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0352 2 3237240 3242105 Lja4g3328 4 62981671 62985420 ECH
Lja1g4178 1 53221050 53223085 Lja4g3328 4 62981671 62985420 ECH
Lja4g3328 4 62981671 62985420 Lja4g3328 4 62981671 62985420 ECH
Lja4g3328 4 62981671 62985420 Lja2g0352 2 3237240 3242105 PCT