Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g4178 ATGGAAACCAAAGACCCTCTGGACATAAAATCTTCCAAGAAATTTCCATTAACATTGAGGTTGGCGGTTTTAGTAATCGCCATGGTTTGTGGAATATACATTTGCTCAATTTATTTAGAGCAAAAAGGTTTAGGCACAAACATCAAGTTGTTAGGCTTCACTAACAATGTCTTTAACCAGCCCTGTAATCATCCTTCAAGTGTGGAAGAATGGGAAGTGCCATACTTGCATTATCCACAACCCAGAACATATAGCAGAGAGGAGTGTGCTTGCAATCCTGTTCGATTTTTTTGCATTGTGTCAATGCAAAGATCTGGGAGCGGTTGGTTTGAGACACTTTTGAACAGTCATATTAATGTAAGCTCCAATGGAGAAATATTTTCGGTAGGGAAAAGAAGGGAGAACGTTTCTTCTATTTTGAAGACAATGGATAAAGTGTATAATCTTGATTGGTTCACCAGTGCTTCCAAGAATGAGTGCTCTGCAGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTGATGGAGCATCATAAGGAGATAGTGGAGTACTTCGAACGGAGAAGAATTTCTGCTATATTCCTGTTCAGAAGGAATTTGCTCCGGAGAATGGTGTCTGTGCTAGCTAATTCCTATGACAAAGATACCAAACTACTGAATGGGACTCATAAGTCTCACGTGCATTCTTCGGCGGAGGCTAAAATTCTTGCCAACTACAGGCCAGGGATCAATATCACATTATTGATACCAGAGCTGAAGCTAACAGAAGAAACAGCTAACAAGGCCATTGCATACTTTAAGAACACTCGTCACATTGTACTCTACTACGAGGATCTTGTCAACAACCGCAATAAACTCAAGGATGTTCAGGAATTTCTAAGGGTTCCATACAGAGATCTAGAGAGCCATCAAGTAAAGATACATACTGCCCCATTATCAGAGCAAATTGAAAACTGGGATGAAGTCCTGAAAGCACTGACAGGGACGCCATACCAGAGTTTTCTCTAG 1008 0.4087 METKDPLDIKSSKKFPLTLRLAVLVIAMVCGIYICSIYLEQKGLGTNIKLLGFTNNVFNQPCNHPSSVEEWEVPYLHYPQPRTYSREECACNPVRFFCIVSMQRSGSGWFETLLNSHINVSSNGEIFSVGKRRENVSSILKTMDKVYNLDWFTSASKNECSAAVGFKWMLNQGLMEHHKEIVEYFERRRISAIFLFRRNLLRRMVSVLANSYDKDTKLLNGTHKSHVHSSAEAKILANYRPGINITLLIPELKLTEETANKAIAYFKNTRHIVLYYEDLVNNRNKLKDVQEFLRVPYRDLESHQVKIHTAPLSEQIENWDEVLKALTGTPYQSFL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g4178 335 PANTHER SULFOTRANSFERASE 1 335 - -
Lja1g4178 335 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 335 - -
Lja1g4178 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 299 IPR027417 -
Lja1g4178 335 Gene3D - 94 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g4178 Lja-Chr1 53221050 53223085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g4178 - - aprc:113866277 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g4178 1 53221050 53223085 Lja2g0352 2 3237240 3242105 ECH
Lja1g4178 1 53221050 53223085 Lja4g3328 4 62981671 62985420 ECH
Lja1g4178 1 53221050 53223085 Lja1g4178 1 53221050 53223085 ECH