Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0352 ATGGTGGGAGAAATGTGTTTCATCTACAAGGATATTCTTGTCATAAAGCCTCCAAAGAAATCGCCAATGTTATTAAGGACATCAGTCATGGTATTTTCGATGGTGTGCTGTATTTTTATCTTCTCTGTATGTCTAAAGCAGATAAACACCCAAGCAAGGACTAAATTTGTGGACTTCAAAGTCATTGACAACATTTCTCAGAGTAGAGTGAAGGAAAAATATGTTCCTCACCTAGTACATTATCCCAAGCCGGTGTCCTTTAACAGGAATGAATGTGCTCATAATCCTGTCATGTTCTTTGCCATATTGTCAAATCAGAGATCAGGCAGCGGGTGGTTCGAGACCCTTCTCAATAGCCACATTAATGTAAGCTCAAATGGAGAGATATTTTCCGTTAAAGAGAGAAGGGAAAATGCTTCTTCAATTTTACAGACTTTAGATAGGGTTTACAATTTGGACTGGTTCAGTAGTGCTTCCAAGAATGACTGCTCTGCTGCAACTGGCTTAAAGTGGATGCTTAATCAGGGATTAATGCAGCACCATAAGGAAATAGCAGAATACTTCAACCGTAGAAATGTTTCTGTCATATTTCTTTTCAGGAGAAACTTACTTCGCAGGATGGTATCAATGCATGCCAATTCCTATGATCGTTATGCTAAGCTATTGAATGGAACACACAAGTCTCATGTACACTCTGCAGAAGAGGCTGATATTCTTTCAAAGTACAAGCCATTCATAAATTCTACATCGTTGCTGGATGACTTGAAGGATATGGAGATGAAAGCTGCAAAGGCTTTAGAATACTTCAATAGCACCCGACACATGATCCTTTACTACGAGGATCTTGTGAGAGATAACACAAAGCTGAGAGATGTGCAAGAGTTTTTAGGATTGCCAGAGATGGAGTTAACAAGCCGTCAGGTTAAGATACATAGAGGACCATTATCAGACCACATTAAGAACTGGGATGAGGTTAACAAGACACTCACAGGAACCATTTATGAGAGTTTCCTTGAAGCTGATTATTAG 1029 0.3936 MVGEMCFIYKDILVIKPPKKSPMLLRTSVMVFSMVCCIFIFSVCLKQINTQARTKFVDFKVIDNISQSRVKEKYVPHLVHYPKPVSFNRNECAHNPVMFFAILSNQRSGSGWFETLLNSHINVSSNGEIFSVKERRENASSILQTLDRVYNLDWFSSASKNDCSAATGLKWMLNQGLMQHHKEIAEYFNRRNVSVIFLFRRNLLRRMVSMHANSYDRYAKLLNGTHKSHVHSAEEADILSKYKPFINSTSLLDDLKDMEMKAAKALEYFNSTRHMILYYEDLVRDNTKLRDVQEFLGLPEMELTSRQVKIHRGPLSDHIKNWDEVNKTLTGTIYESFLEADY* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0352 342 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 342 - -
Lja2g0352 342 Gene3D - 99 328 IPR027417 -
Lja2g0352 342 Pfam Sulfotransferase domain 102 302 IPR000863 GO:0008146
Lja2g0352 342 PANTHER SULFOTRANSFERASE 1 342 - -
Lja2g0352 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 307 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0352 Lja-Chr2 3237240 3242105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0352 - - gmx:100789437 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0352 2 3237240 3242105 Lja4g3328 4 62981671 62985420 ECH
Lja2g0352 2 3237240 3242105 Lja2g0352 2 3237240 3242105 ECH
Lja1g4178 1 53221050 53223085 Lja2g0352 2 3237240 3242105 ECH
Lja2g0352 2 3237240 3242105 Lja4g3673 4 68544589 68549664 PCT
Lja4g3328 4 62981671 62985420 Lja2g0352 2 3237240 3242105 PCT