Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g3036 ATGAGGGAGGTTGTGATCATTTCAATTGCTGCTACTCTTGGGAGTCTGCTTGTTGGATGGGATAGTTCAACCATTGCAGGGGGCATGAGTTACATAAAAAAAGAATTTAACTTGGGGACATATCCCACACTTGAGGGGCTAATTGTGTCCATGTCCTTTCTCACCGGCACCTTTGTGACAATATTCTCCGGGACAGTTTCCGACATGTTCGGAAGGCGACCAATGTTGATAACATCATCGGTTATGTTTTTCCTCAGTGGTTTGGTGATCATGTGGGCTCCTAATGTCTCTGTAGTTCTGTTCTCAAGGCTGTTGGATGGAGTTGCCATTGCACTAGCCATAACTCTCACTCCTCTCTACATATCTGAGATAGCGCCGCCGGATATCCGAGGCACGCTGAACACGCTGCCGCAATTTTCGTGCTCTGGGGGAATGTTTGTTGCATACATCATGGTGTTCTCCATGTCCTTGATGGACTCACCAAGTTGGAGGGCCATGCTTGGTGTTGTTTCGGTTCCTTCCATTGCATACTTTCTTCTCGCCGTGTTTTATCTTCCGGAATCTCCTCCATGGCTTGTAAGTAAAGGAAGACTTACTGAGGCTACCAAAGTTCTTCAAAGGATTCGCGGCGTGGAAGATGTTTCAGGTGAAATGGCTTTGCTGGCTGAAGGTATGTGTCCCGGGGGTGAAGACACAACCATAGAAGAGTACATAGTTTCCCCTGCTATTGAGAGCATTTCAATCAAGGAAGCAGGGAAGGATTGCATAAAGCTCTATGGAGCTAACCAAGGAGTTTCAATGATTGCTCAGCCAGTGAGTGGACAAGGTAGCATGATATCACGAAGTATGTTAACTTTGTCGCGCCAGGGAAGCGTTCTTGCCCAGGCAGCTTCTAATCTCAAGGACCCTATGGTCAATCTCTTTGGGAGCATGCATGATGCTAACCTTCCTCCTGAGTTGTTTGGAAGTTCAAGAGGTAGCATGATAATTCCCAAAGTGCCTAGTGTTTCCAGCATGGGAGCAGATCATGATCAGAGCCCTTTTGGTACTAGTGACAATCTCCATGCGCCATTGCTCAATGCTATTGATAAGGCTTTTGAATCTAAGGACATGTCAGGCATGAGTAGCAATAGCAACTTGAGAGGTAACATGGGGTTGGCTCAGGGTAGTGCTGGAGAAATACCTAAAAACACAAATATTGGTGGAGGTTGGCAATTGGTTTATAAATCAGTTGATCAAACAACAGGGGGTGGGAAAAAAGAAGGAGGAGGAGGGCTACAAAGGGTTTATCTACATGCAGATCCTACCACAATGTCTCGGGAGCAAAGTTCACTTGCTTCAATTTCGGGTTATGACTTGCATGAAGAAGGTGGTGGTGAAGCTTTTCAGGCGTCTGCACTCGTCAGTCGTTCAATTCTCTATACTAAGGATATGACAACCAAACCACAAGCTCCTCCAAAGCGTGTAGGTTGGGGAGCTTTGCTAGAACCAGGAGTGAAACGTGCATTGATTGTGGGAGTAGGACTTCAAATTCTCCAGCAGGCTTCTGGCATAAATGGATTTCTATACTATGCTCCCCAGATTCTTGAGGAAGCAGGAGTAGGGGCACTTTTGTCAAATTTGGGCATTAGTTCAACATCCGCTACACTACTCGTAAATGTCATCACAACATTCTCCATGCTTCCTTGTATAGCTATTTCCATGAGGCTAATGGATGTTGCAGGAAGGAGGTCAATACTTCTATACACAGTACCAATTTTGATAGTGTCTCTCATGGTACTAGTACTCCGAGACTTGTTTCGCATGAGTCCTATCCTCAATGCAGCTATCACTGCTGTAAGTGTTATGGTATACGAAAGCTGCTTCTGCATGGGCCTTGGTGTGATTCCAAACATCTTATGTTCTGAAATCTTTCCAACAAGTGTTCGCGGAATCTGCATTTCTATATGTTCCCTTACATACTGGATCAGCACCTTGATCATCACTTCTATGTTCCCCTTTTTGCTCAATCTTCTGGGTCTTACTGGGGTCTTTGGTTTATTTGTTGTTGGGTGCATCGTGACATGGATTTTTGTCTACTTAAAAGTTCCTGAAACAAAAGGCATGCCTTTAGAGGTCATCATTGAGTTCTTTGCTATTGGTGCAAAGCCTGAAACATCTTGA 2163 0.4494 MREVVIISIAATLGSLLVGWDSSTIAGGMSYIKKEFNLGTYPTLEGLIVSMSFLTGTFVTIFSGTVSDMFGRRPMLITSSVMFFLSGLVIMWAPNVSVVLFSRLLDGVAIALAITLTPLYISEIAPPDIRGTLNTLPQFSCSGGMFVAYIMVFSMSLMDSPSWRAMLGVVSVPSIAYFLLAVFYLPESPPWLVSKGRLTEATKVLQRIRGVEDVSGEMALLAEGMCPGGEDTTIEEYIVSPAIESISIKEAGKDCIKLYGANQGVSMIAQPVSGQGSMISRSMLTLSRQGSVLAQAASNLKDPMVNLFGSMHDANLPPELFGSSRGSMIIPKVPSVSSMGADHDQSPFGTSDNLHAPLLNAIDKAFESKDMSGMSSNSNLRGNMGLAQGSAGEIPKNTNIGGGWQLVYKSVDQTTGGGKKEGGGGLQRVYLHADPTTMSREQSSLASISGYDLHEEGGGEAFQASALVSRSILYTKDMTTKPQAPPKRVGWGALLEPGVKRALIVGVGLQILQQASGINGFLYYAPQILEEAGVGALLSNLGISSTSATLLVNVITTFSMLPCIAISMRLMDVAGRRSILLYTVPILIVSLMVLVLRDLFRMSPILNAAITAVSVMVYESCFCMGLGVIPNILCSEIFPTSVRGICISICSLTYWISTLIITSMFPFLLNLLGLTGVFGLFVVGCIVTWIFVYLKVPETKGMPLEVIIEFFAIGAKPETS* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g3036 720 Gene3D MFS general substrate transporter like domains 457 713 IPR036259 -
Lja4g3036 720 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja4g3036 720 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 700 IPR020846 GO:0022857
Lja4g3036 720 Gene3D MFS general substrate transporter like domains 2 247 IPR036259 -
Lja4g3036 720 Pfam Sugar (and other) transporter 467 708 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja4g3036 720 Pfam Sugar (and other) transporter 9 219 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja4g3036 720 PRINTS Sugar transporter signature 513 523 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja4g3036 720 PRINTS Sugar transporter signature 635 647 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja4g3036 720 PRINTS Sugar transporter signature 612 633 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja4g3036 720 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja4g3036 720 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja4g3036 720 PANTHER - 1 719 - -
Lja4g3036 720 SUPERFAMILY MFS general substrate transporter 7 705 IPR036259 -
Lja4g3036 720 ProSitePatterns Sugar transport proteins signature 1. 567 583 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja4g3036 720 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g3036 Lja-Chr4 57233609 57237795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g3036 51 720 Organic Solute Cotransporters AT3G51490 52.305 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g3036 - - gmx:100792264 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g3036 4 57233609 57237795 Lja4g3036 4 57233609 57237795 ECH
Lja2g0650 2 5852677 5856911 Lja4g3036 4 57233609 57237795 ECH
Lja3g0433 3 4430453 4433237 Lja4g3036 4 57233609 57237795 ECH
Lja4g3036 4 57233609 57237795 Lja4g3036 4 57233609 57237795 PCT