Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0433 ATGGCTGAGGGTGAAGCAGCAGCTGGGAAATCTCTTAGGGATTTTGATCCTCAAAAGAAACCCAAAAGGAACAAGTTTGCTTTGGCTTGTGCCATTCTAGCTTCCATGACTTCCATCCTACTTGGTTATGATATTGGTGTGATGAGTGGAGCAGTCATCTACATAAAAAGGGACCTTAAAATCTCCGACGTGCAAATCGAAATCCTGTCCGGAATCATGAACATTTACTCTCCGATAGGCTCTTACATAGCCGGCAGAACCTCCGACTGGATTGGTCGGCGTTACACAATCGTGCTTGCCGGTTTGATTTTCTTTGTGGGAGCCATCTTGATGGGATTTTCTCCCAACTATGCGTTTCTCATGTTTGGCCGCTTCGTCGCCGGCGTTGGCATTGGTTTCGCGTTCCTCATTGCCCCTGTCTACACCTCTGAAATCTCTCCAACTTTGTCTCGTGGCTTCCTCACTTCATTGCCTGAGGTTTTTCTAAATGCGGGAATCTTAATCGGATACATATCAAACTACACATTTTCCAAGCTACCACTCCGCCTAGGCTGGCGCCTCATGCTTGGAATCGGTGCTATCCCCTCCATATTTCTCGCTGTGGTAGTGCTAGCCATGCCGGAGTCACCAAGGTGGCTCGTTGCCAAGGGTCGCATTGGAGAAGCTAGAAAAGTCCTCAACAAAATCTCTGACTCCAAGGAAGAGGCTCACCTCAGGCTAGTCGATATCAAACACCAAACTGGAATCCCCGAGGATTGCAATGACGAGGTTGTTCAGCTAAACAACCAAGTTCAAGTCCAAGGCAAGGGTGTGTGGAGAGAACTTTTTCTTCATCCCACCCCCGCAGTTCGTCACATTTTCATCGCCTCCCTCGGGATTCATTTCTTCGCACAAGCCACTGGCATAGACGCTGTTGTTTTGTACAGCCCCAGAATCTTTGAGAAGGCAGGGATCAAATCAGACACATACAAGCTCCTTGCAACGGTAGCTGTTGGATTCGTGAAAACCTTGTCCATTTTATTGGCTACATTTTTGTTGGACCGTGTCGGGCGACGCGTGTTGTTGTTGACCAGTGTGGGTGGGTTGGTCCTTTCACTTATGACCCTTGGGGCGAGTCTCACTGTCGTTGACCACTCACATGTCACATGGGCCCTTGGGCTCAGCATCGCTGCGGTGTTATCCTACGTGGCCACTTTCTCCATTGGGTCAGGGCCCATTACATGGGTTTATAGTTCTGAGATATTTCCTCTGAGGCTTCGTGCTCAAGGTGTGGCTATTGGGGCTGTGGTGAATAGGCTCACCAGTGGGGTTATCTCAATGACCTTTTTGTCCCTCTCTAATGCAATCACTATTGGAGGCGCTTTCTTTCTTTTTGCGGGAATTGCAGTTTGCGCGTGGATTTTTCACTACACATTGCTCCCTGAAACACGTGGCAAGACTCTAGAGGAAATAGAAGGGTCTTTTGGTCATTTCTGGAGAAAGCCTAATGCCGCCAAAGAAGTTAACGGTAGAAACAATTTTATTAACCAAGTCAAATTAAGTACAAATGCTGACAACAAATAG 1563 0.4779 MAEGEAAAGKSLRDFDPQKKPKRNKFALACAILASMTSILLGYDIGVMSGAVIYIKRDLKISDVQIEILSGIMNIYSPIGSYIAGRTSDWIGRRYTIVLAGLIFFVGAILMGFSPNYAFLMFGRFVAGVGIGFAFLIAPVYTSEISPTLSRGFLTSLPEVFLNAGILIGYISNYTFSKLPLRLGWRLMLGIGAIPSIFLAVVVLAMPESPRWLVAKGRIGEARKVLNKISDSKEEAHLRLVDIKHQTGIPEDCNDEVVQLNNQVQVQGKGVWRELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDTYKLLATVAVGFVKTLSILLATFLLDRVGRRVLLLTSVGGLVLSLMTLGASLTVVDHSHVTWALGLSIAAVLSYVATFSIGSGPITWVYSSEIFPLRLRAQGVAIGAVVNRLTSGVISMTFLSLSNAITIGGAFFLFAGIAVCAWIFHYTLLPETRGKTLEEIEGSFGHFWRKPNAAKEVNGRNNFINQVKLSTNADNK* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0433 520 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja3g0433 520 Pfam Sugar (and other) transporter 30 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja3g0433 520 Gene3D MFS general substrate transporter like domains 20 490 IPR036259 -
Lja3g0433 520 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0433 520 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0433 520 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0433 520 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0433 520 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0433 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 477 IPR020846 GO:0022857
Lja3g0433 520 SUPERFAMILY MFS general substrate transporter 16 485 IPR036259 -
Lja3g0433 520 TIGRFAM SP: MFS transporter, sugar porter (SP) family 19 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja3g0433 520 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 508 IPR045262 GO:0015144
Lja3g0433 520 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 14 508 - -
Lja3g0433 520 CDD MFS_PLT 33 484 IPR044776 GO:0005351
Lja3g0433 520 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0433 Lja-Chr3 4430453 4433237 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0433 17 520 Organic Solute Cotransporters AT3G18830 67.126 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0433 - - gmx:100816478 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0433 3 4430453 4433237 Lja3g0433 3 4430453 4433237 ECH
Lja3g0433 3 4430453 4433237 Lja2g0650 2 5852677 5856911 ECH
Lja3g0433 3 4430453 4433237 Lja4g3036 4 57233609 57237795 ECH