Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja2g0650 ATGTTGCCAGTTGTGATTGTTGCAGTTGCTGCTACACTTGGGAATCTCCTGGTCGGATGGGATAGTTCAACAATTGCTGGGGGTATGACCTACATGAAGGTGGAATTCAACTTGGAGACAAATCCCACACTTGAAGGGTTAATCGTGGCCATGTCATTCATAACCGGAACCGTTGTTACAATCTTCTCTGGGACAGTATCTGATTTGGTTGGAAGGCGCCCTATGCTGATAACATCTTCTCTCATGTTTTTCGTTAGCGGATTGATAATGTTGTGGGCTCCTAATGTTAGTGTTGTTCTCTTGTCGAGGATACTTAACGGGGTTGCTGCTGCTCTTGCCGTCACTTTTAATCCTCTCTATATATCCGAGATCGCGCCGGCGGATATCAGAGGCCAATTGAACACTATTACACAGTTTGCTTGCTCTGGTGGAATGTTCTTGTCTTATATCTGGGTGTTCTCAATGTCCTTGATGCAATCGCCAAATTGGAGAGTCATGCTCAGTGTTATTTCTATTCCTTCTATTGTATATTTTGCTCTGGCCGTGTTTTATCTGCCTGAATCTCCAAGGTGGCTTGTGAGCAAAGGGCGAATCCGTGAGGCTGAAAAAGTTTTGCAAAGGCTTCGCAATGCTGAAGACGTTTCTGGGGAGTTGGCTTTGTTGGCGGAGGGTCTCAGCCCTGGGGGTGAAGACATTTCCATAGAAGAGTATGTAGTTGCTCCGGCCAGTGATTTCCTTGTGAACCAGGAAGCAGGGAAAGATTACATAAAGTTATATGGACCCAATGAGGGTGTTGCAATGGTTGCTCAACCAGTTACTGGACAGGGTAGCATGATGTCCCGCAGCATGTTGTCCCGCAGCATGTTGTCTCAGCAAGGAAGCTTTACATCTCAGGCTGCAGCTGGTTTTAAGGATCCTATTGTCAATCTCTTTGGAAGTTTGCATGAGAGTAATCTTGCTGAGAATGAAGGTTCACGCAGCATGCTAGTTACTCATGCCAACAGTATCTTTAGTGTGGGGGATCCAGAGTCCAGCCCCTTTGACACCAGTGACAACCTGCGTGCTCCGCTAATGTCATTTCAAGGCGGTGCTGGGGAGAAGGATAGGGCTTATGGATCCAAGGACATGTTAGGTATGGGGAGCAATAGCTATCTCAGAAGTAATAGCAGTTTGGTCCATGGAAATGCTGGCGAAACACCTAGAAGTACAAACATTGGCGGAGGCTGGCAATTGGTTTATAAATCAGCCGACGGTGGTGCTGGGGGTGGGAAAAGAGAAGGGCTCCAAAGGGTTTATTTGCATGCAGATCCTGCCGCAGTGTCTCACTCTCAACATGCTTCATTTGTTTCAACTTCTGGTTATGACATGGCGATAGATGGTGGTGAAGTTTATCAGGCTTCTGCTTTAGTCAGCCGGTCGGTTCTAGGTACTAACGATATATTGAAGATGCCTGAAGTTTCTGCAAAAGGTCCAAGTTGGAAAGGTCTGCTAGAACCAGGAGTCAAGCGTGCATTAGTGGTTGGGATAGGACTTCAAATTCTTCAACAGGCTGCTGGCATAAATGGGTTTCTATACTATGCTCCCCAGATTCTCCAGGAGGCGGGAGTAGGGTCTCTTCTGTCAAATTTGGGCATTAGTTCAACATCTGCTTCTTTTCTTGTAAATATCATCACAACATTCTGTATGCTTCCTTGTATAGCTATTTCTATAAAGCTCATGGATATTGCTGGCAGGAGGTCAATCATGCTGTATACAACACCCATTTTGATTGTTTGTCTCCTGATACTAGTGCTCCGCGAGTTCTTTTACCTCAGTTCGGTCCTCGATGCCGCAATAACCGCTGTTTGTGTTATCGTCTATGAAAGCGTCTTCTGCATGGGCATAGGTATTATTCCCAACATCATATGTGCCGAGATCTTCCCAACCAATGTTCGCGGAATCTGCATTTCTCTGACTTCCCTCACATATTGGGTTTGCACCTTGATAGTCACTTTGGCATTTCCCTATCTGCTCCAGCTCATAGGCCTCACTGGTGTCTTTTCACTATTTGTTGGTGGCTGCATTATTACATTGATATTTGTCTACTTGAAAGTGCCTGAAACAAAGGGCATGCCTTTGGAAGTCATCATCGAGTTTTTTGCTATTGGTGCAAAGCCTGGTACTGATCCTGCCACAATAGGAATCAAAGTTTGA 2193 0.456 MLPVVIVAVAATLGNLLVGWDSSTIAGGMTYMKVEFNLETNPTLEGLIVAMSFITGTVVTIFSGTVSDLVGRRPMLITSSLMFFVSGLIMLWAPNVSVVLLSRILNGVAAALAVTFNPLYISEIAPADIRGQLNTITQFACSGGMFLSYIWVFSMSLMQSPNWRVMLSVISIPSIVYFALAVFYLPESPRWLVSKGRIREAEKVLQRLRNAEDVSGELALLAEGLSPGGEDISIEEYVVAPASDFLVNQEAGKDYIKLYGPNEGVAMVAQPVTGQGSMMSRSMLSRSMLSQQGSFTSQAAAGFKDPIVNLFGSLHESNLAENEGSRSMLVTHANSIFSVGDPESSPFDTSDNLRAPLMSFQGGAGEKDRAYGSKDMLGMGSNSYLRSNSSLVHGNAGETPRSTNIGGGWQLVYKSADGGAGGGKREGLQRVYLHADPAAVSHSQHASFVSTSGYDMAIDGGEVYQASALVSRSVLGTNDILKMPEVSAKGPSWKGLLEPGVKRALVVGIGLQILQQAAGINGFLYYAPQILQEAGVGSLLSNLGISSTSASFLVNIITTFCMLPCIAISIKLMDIAGRRSIMLYTTPILIVCLLILVLREFFYLSSVLDAAITAVCVIVYESVFCMGIGIIPNIICAEIFPTNVRGICISLTSLTYWVCTLIVTLAFPYLLQLIGLTGVFSLFVGGCIITLIFVYLKVPETKGMPLEVIIEFFAIGAKPGTDPATIGIKV* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja2g0650 730 SUPERFAMILY MFS general substrate transporter 9 707 IPR036259 -
Lja2g0650 730 ProSitePatterns Sugar transport proteins signature 1. 63 80 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja2g0650 730 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 702 IPR020846 GO:0022857
Lja2g0650 730 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 1 726 - -
Lja2g0650 730 Gene3D MFS general substrate transporter like domains 471 715 IPR036259 -
Lja2g0650 730 ProSitePatterns Sugar transport proteins signature 1. 569 586 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja2g0650 730 PRINTS Sugar transporter signature 614 635 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0650 730 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0650 730 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0650 730 PRINTS Sugar transporter signature 515 525 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0650 730 PRINTS Sugar transporter signature 637 649 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lja2g0650 730 PANTHER - 1 726 - -
Lja2g0650 730 Pfam Sugar (and other) transporter 488 710 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja2g0650 730 Pfam Sugar (and other) transporter 7 220 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja2g0650 730 Gene3D MFS general substrate transporter like domains 2 336 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja2g0650 Lja-Chr2 5852677 5856911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja2g0650 51 718 Organic Solute Cotransporters AT3G51490 51.073 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja2g0650 - - lja:Lj0g3v0317779.2 1143.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g0650 2 5852677 5856911 Lja2g0650 2 5852677 5856911 ECH
Lja2g0650 2 5852677 5856911 Lja4g3036 4 57233609 57237795 ECH
Lja3g0433 3 4430453 4433237 Lja2g0650 2 5852677 5856911 ECH